Syngnathus scovelli (Gulf pipefish): 125967218
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Entry
125967218 CDS
T08785
Name
(RefSeq) cysteine--tRNA ligase, cytoplasmic isoform X1
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
125967218
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sscv01007
]
125967218
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sscv03016
]
125967218
Enzymes [BR:
sscv01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
125967218
Amino acid related enzymes [BR:
sscv01007
]
Aminoacyl-tRNA synthetase
Class I (G)
125967218
Transfer RNA biogenesis [BR:
sscv03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
125967218
Prokaryotic type
125967218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
tRNA-synt_1
Arc1p_N_like
Motif
Other DBs
NCBI-GeneID:
125967218
NCBI-ProteinID:
XP_049574006
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Position
4:6932862..6949868
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AA seq
827 aa
AA seq
DB search
MSITGEQVFEYGFLLQIKEDAALAAALNDYLTTRSYLAGFSPSQADQQALKLLHRPPDPQ
HVHALRWYRHITCLQQDLSPDSSRKGKRVQPQWSPPAGTDVPQLRLYNSLTRAKELFVPQ
NGKKVTWYSCGPTVYDASHMGHARSYISFDILRRVLKDYFKYDVFYCMNITDIDDKIIKR
ARQNYLMDQYKEKQPQAVQILKDVMTARVPFQARLASTTDADKKQMLERLDAAITSALQP
LQAALESKAADDIVQPLAQALLANSKDMLSDWLDSQFGSEVTDNSIFAILPTFWEGEYHK
DMDALNVLPPDVLTRVSEYVPEIVEFVKKIVSNGYGYESNSSVYFNTAKFDACPKHSYAK
LVPEAVGDQKALQEGEGDLSISADQLSEKKSPNDFALWKASKPGEPSWDSPWGKGRPGWH
IECSAMAGSILGESMDIHGGGFDLRFPHHDNELAQSEAFFENDHWVRYFLHTGHLTIAGC
KMSKSLKNFITIKEALAKNTARQLRLAFLMHSWKDTLDYSPNTMELVVQYEKFLNEFFLN
VKDILRAPTDITGQFEKWDVAEVALNESFYDKKAAIHVALCDNIDTRTAMEEMRQLVNQS
NSYIASKKGAKLRPNRMLMESIAMYLTKMLKIFGAIEGSEPIGFPVGGQEQSVDLESTVM
PYLSVLSTFREQVRIIARQQKVMELLVLCDDVRDVKLPELGVRLEDHEGLPTVVKLVDKE
ILLKERNEMIKMEEEKQRKKEEAARKKEEQEIAKLAKMKIPPFEMFLTDTDKYSKFDEMG
FPTHDAEGKELSKGQEKKLRKLYENQQKIHKEYLLSIGVQSGEAKKT
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcacaggagaacaagtctttgagtatggcttcttgctccaaataaaagaggat
gctgcacttgcagcagcactgaatgactacctaacaactcgcagctacctggctggtttc
agcccttctcaggctgaccagcaggcacttaagcttctccacaggcccccagacccacaa
catgtccacgctctgcgttggtacagacacataacatgcctccagcaagacctgagccca
gacagcagcaggaaaggaaagagggtacagcctcagtggtctccaccagctggaacagat
gttccccaactcagactctataatagtctcaccagagcaaaggaactctttgttcctcag
aatggaaagaaggtcacatggtacagctgtggtccaacagtgtacgatgcctcccacatg
ggacatgcccgatcatacatctcttttgatattctgcgaagagtactgaaggactacttc
aagtatgatgttttttactgcatgaacatcacagacatcgatgacaaaataattaaaagg
gcacgtcagaactacctaatggaccagtacaaggagaagcaaccacaagctgttcaaata
ctgaaggatgtgatgactgcccgagtgccctttcaggctcgcttggcctcaactactgac
gcagataaaaaacagatgcttgaaaggcttgatgctgccatcaccagtgctctgcagcct
ctgcaggcagcattggagagtaaagctgcagatgacatcgtgcaacctctggcccaggca
ctgctggcaaattccaaggacatgctgtctgactggctggacagtcagtttggaagtgaa
gtcacagacaactcaatctttgctattctgcctacattttgggagggagagtaccataaa
gacatggacgccttgaatgttcttcctcctgatgtccttacccgtgtcagtgaatatgtg
ccagaaattgtggagtttgtgaagaagattgtctcaaatggctatgggtatgaatcaaat
agctctgtttactttaacactgcaaagtttgatgcctgtccaaaacactcgtatgccaaa
cttgtgccagaggcagttggagatcagaaggctttacaagagggagaaggtgacctcagt
atttctgccgaccagttaagtgagaaaaaatcacccaatgattttgccttgtggaaagca
tctaagcccggagagccttcatgggactctccttggggaaaaggaaggcctggctggcat
attgagtgctcggccatggccggctccatcttgggggagtcgatggatattcacggtggt
gggtttgatctcagattcccccatcatgacaacgagctggctcagtctgaggctttcttt
gagaatgatcattgggtccgttacttcttgcacactggtcacctgacgattgcaggatgc
aagatgtccaaatctttgaagaattttattaccattaaggaagccttggcaaaaaacaca
gcccgccagctccgtcttgctttcttgatgcattcgtggaaagataccttggattactcc
cccaacactatggagttagttgtccagtatgagaagttcctgaatgagtttttcttgaat
gtgaaggacattctgcgtgcacctactgacatcacagggcagtttgaaaagtgggatgta
gcagaggtggcacttaacgaaagtttttacgacaagaaggcggccatccacgtggctctg
tgtgacaacattgacacccgcacagccatggaggagatgaggcagctggttaatcagagc
aacagctacatcgccagcaagaaaggtgctaagctgagacccaaccgcatgctgatggaa
agtattgccatgtatctcaccaaaatgctcaagatatttggtgcaattgaaggttcagag
cccattggtttcccagttggaggacaagaacagagcgttgacctggagagcacagtgatg
ccttacctttcagttctgtctactttccgagagcaagtacgaataattgccagacagcag
aaggtcatggagttgctggtgctttgtgacgatgtccgtgatgttaaattaccggagctg
ggtgtccgactcgaagatcatgaaggactgccaactgtggtgaaactggtggacaaggag
attttattgaaggaacgcaatgaaatgatcaagatggaggaagagaagcagaggaaaaaa
gaggaggctgctaggaagaaagaagaacaagagatagctaagcttgctaaaatgaagatt
cctccatttgagatgttccttacagacacagacaaatattccaaatttgatgaaatgggt
tttcccacacatgatgctgaagggaaggaactcagcaaaggacaagaaaagaaactgcgc
aagctttatgaaaatcaacaaaagatacataaagagtaccttttgagcattggcgtgcag
tcaggggaggcaaaaaaaacctaa
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