Syngnathus scovelli (Gulf pipefish): 125969320
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Entry
125969320 CDS
T08785
Name
(RefSeq) sorbin and SH3 domain-containing protein 2 isoform X1
KO
K23708
sorbin and SH3 domain-containing protein 2
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
125969320
Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
Src homology (SH) domain-containing proteins
Other SH2 and SH3-containing proteins
125969320
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SH3_1
SH3_9
SH3_2
Sorb
Motif
Other DBs
NCBI-GeneID:
125969320
NCBI-ProteinID:
XP_049577188
LinkDB
All DBs
Position
5:1549287..1613235
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AA seq
1755 aa
AA seq
DB search
MCFVCAVCSSACVCCACDHPAGMFSDSGGCARKSVAVTLTLSPMKRVQSSPNLASGSDPH
STDYSSWRSHSATDGLKNGDSISSSLAAKGFRSVRPNLQDRKSQAPLPLDSTARHSPFLS
RSSESLDYPSGLMSKGLSPSPYVASAAASPPASPVTVSALSHYSSSTAGLLDELQICSLD
SPGASPTPSPTLSHVSVFTAAGPDDALTAAAAAAATVTNGQVLSHAMNGGTGHSARPLSP
PSYPPPPASFRTGLLRQSQTSEGSEAFTRESVVSGDASFSSTVPIARFSEEETKVSVIKA
PHYEGIGPVDESGIPIAIRTTVDRPKDWYKTMFKQIHKVHKADDDYSDTYSATYAVVNND
DYGVPPNATLAHPAPRTHTYRPLAKSLSDSGGLRHAARDPSPSPVPPPPPAPSLLQLRAR
DSDRDRDTPDTNQWGPPDRKVDTRKYRAEPRSIFEYEPGKSSILEHERATYDDIDLENEP
WYKFFSELEFGRPPPKKRLDYNPDVSARQRIEATLLVAPADKLHERPSSAASDYRKRRKS
EPAGPQANSLPQPSQAATSPKAPDASRSAGGAPKKPVTRSSPSSPSRTKGGAACVMYSNT
LTSPGPCCHSSLPPVPLRFPEEAPATSCEEAPVPPPPSSKLRSRSCDDLLGDSPNRRRAC
RSESAGSLLCDRSGSNGSVGSVPRLRRRLPHDSPAFLKLYRKMHHIDRAHLLPSDVIRSV
RARILELEQQPHLHLHRLSPWAPSGGSEVPRDTVPTRISTFESLIEKSKSMPNLGDSEAA
SGATTPGGSSSRASSGGATPSFPKRRFSIESLLEEDDSGNQPAPRATDQSRKPRSPPEGQ
PRVGPEPNRGASSLAPPAPRVPQADYSDSEQDAIASDLSDFIQVEGSSFCSESDFDHCSL
TSSESLYGSAILHQHRRHHLHHHHHPGHQSVGQNQGYQHRHLISSCKGRCPASYTRFTTM
LRHERQRARQDPQRPPPPSRSIRSLVQSAESQQSMSKLAYLVSPVPFHKKKGGGGGGGSG
HSRGSRPKSKQAIYEALDAALRDIYEHIRAERGHRGAGTPDDSILRRILSELLPNVPERS
SSLPGRRCWHEAGPDGYASYRGDPLTPQLQSPRIRSPVSACYGRHLDATNCNDYGEEHGN
ENGVLYSDQDVPTRSYSTMDGRRTPQNRRGAPEREVSHKQMTQLILFSLLHQKQPARAIY
DFKAQTAKELTFKKGDAVNIIRQIDGNWYEGEHRGRVGIFPIAYVEKMASLEKPQPSRPP
PPAHVREIGEAVARYNFNADTNVELSLRKGERVIVIRQVDQNWYEGKIPDTTKQGIFPVA
YVDLLKRSPSKTSVHHLHHVDPHGYRTSSSTPIKPFSHLPPPSPTPVHDRPSTLLRAVTH
EWLSLTVDAPPPHALSATPAPPTPPPLPGHLALSVHKPLAAEYPSDVLGRSAGEQSPAAK
PSESPRAASEPLTSPSRFDVQLSVADPYDELLSVIPDDPDGSPACSATKPRFDKSQPEAI
ESTEHECLRARVPNESPVESQRPPSTRGKAVIELFIQEEDDEEEEGEAREDEEDVFTGRL
GTQADVCSPTRSPSPPTDPPSPSSPRPVHSPPASPRPRPPPLPIFSTSPPVSPSPPLSPL
HSPEPLTPPHTARSPSSTSPPLLFSRRSPPAVPHPGRRSPKMKDPVVGGKPPRSPILSRR
PARGRRRLVQEALHGGGDPFQAVYNYTPRNEDELELREGDIIDVMEKCDDGWFVGTSRRS
KLFGTFPGNYVKPLP
NT seq
5268 nt
NT seq
+upstream
nt +downstream
nt
atgtgctttgtttgcgccgtgtgttcgtctgcatgcgtttgctgtgcatgtgaccacccg
gccgggatgttctcagacagcggcggatgtgctcgcaaaagcgtcgccgtgacgctcacg
ctctcgcccatgaagagggtccagagctcacccaatctggcctcagggagtgatcctcac
tcaacagactacagttcttggcggtctcacagcgcaaccgatggccttaagaacggcgac
tcgatcagctcgtctctggccgccaaaggcttccgcagcgtcaggcccaacttgcaggac
cgaaaatcgcaggcccccctcccccttgactccacagcacgtcactccccctttctgagc
cgcagctccgaatctctcgactacccgtcgggcctaatgtccaaggggctgtcacccagc
ccgtatgtcgcgagcgcggccgcgtcgccccccgcctcccccgtgaccgtctcggccctc
agccactactcctcctccacggcgggtctgctggacgagctgcagatctgtagcctggac
tcgcccggcgcttcgcccacgccgtcgcccaccctcagccacgtctcggtcttcaccgcc
gctggccccgacgacgcgctaacagccgccgccgcagcagcagccactgtcactaacggc
caggtgctctctcatgctatgaacggcggcacgggccacagcgccaggccgctttcgccg
ccatcttacccgccgccgcccgcttcattccgcaccggactcctgaggcagagccagacc
tctgaaggcagcgaggcgtttacccgagagtccgtggtgtcgggcgacgccagcttcagc
agcaccgtgcccatcgcccgcttctccgaggaggaaaccaaggtgtccgtcatcaaagcc
ccccactacgaaggcatcggacccgtggacgagtcgggcatccccattgccatccgcacg
acggtggatcggcccaaggactggtacaaaaccatgttcaaacagatccacaaggtccac
aaagcggacgacgactattcggacacctacagcgcaacatacgccgtcgttaacaatgac
gactacggtgtgccgccaaacgccaccttggcccacccggccccacgcacgcacacctac
aggccgctcgccaagagcctgtcggacagcggcggactacgccacgccgcccgggatccc
tcgccgtcgcccgtgcccccgccgccgcccgcaccctccttgctgcagttgagagcccga
gacagcgaccgtgacagagacacgccggatacgaaccaatggggtccacccgacaggaaa
gtggacacgcgaaagtaccgcgctgagccgaggagtatttttgaatatgaaccagggaag
tcctccattttagagcacgaaagagctacctatgatgacatagatttagagaacgagcct
tggtataagttcttttccgagctggagtttggccgcccgcctcctaaaaaacggctggat
tataatccagacgtctcggctcgccagcgcattgaggcgaccctgctggtcgctcctgcc
gacaagctccacgaaagaccttcgagcgctgccagcgactacagaaagcgaaggaagtca
gagcctgccggcccccaggcgaactctctgccgcagccaagccaagcggcgacgtcgccc
aaagcgcccgacgccagcaggtccgccggcggcgcccccaagaagcccgtcactcgctcc
tcgccgtcctcgccctcacgcaccaaaggtggggccgcatgcgtcatgtattcaaacact
ttgacctctccgggtccttgctgtcactcctccctgcccccggttccgctacgtttccca
gaggaggcgccggcgacctcctgcgaggaggctccagtgccgcccccgcccagcagcaag
ctcaggtcgcggagctgcgacgacttgctgggcgacagtccaaaccggcgtcgcgcctgc
cgttcggaaagcgccggctcgctgctgtgcgaccgctcgggctccaatgggtccgtgggc
tcggtgccgcgcctccggcgccggctgccgcacgactccccggctttcctcaagctctac
cgcaagatgcaccacatcgacagggctcacctgctcccgtccgatgtgatccgttcggtc
cgcgctcgcatcctagagctggagcagcagccccatctgcacctgcaccgcctctcccct
tgggcgccctctggtggatcggaagtgccgcgcgataccgtgcccacgcgcatctccacc
tttgagagtcttatcgagaagtccaaatccatgcccaacttgggagacagcgaggcggcg
tcgggcgccaccacgccaggtggctcatcatcccgagcgagcagcggcggcgccacgcca
agttttccaaaacgccgtttctccatcgagtctctactggaggaggacgacagcggcaat
cagccggcacctcgcgccacggaccagtcgcgcaaacctcgtagcccacccgagggtcag
cctcgcgtggggccggaacccaaccgcggggcctcctccctggctcctcccgccccacga
gtgccgcaagccgactactcggacagcgagcaagatgccatcgcctcggacctcagcgac
ttcatccaagtggagggctcttccttttgcagcgagagcgactttgaccactgctccttg
acgtcctctgagagcttgtacggctccgccattctgcaccaacaccgccgtcatcacctt
caccaccatcaccaccctggtcaccagagtgtgggccagaaccagggctaccaacataga
cacctcattagctcttgcaagggtcgctgcccggcctcctacacccgcttcaccaccatg
ctccggcacgagcgtcagcgggcccgtcaggaccctcagagacctccgcctccgagtcgc
agcatccgctccctggtccagagcgccgagtcccagcagtccatgtccaagctggcctac
ttggtcagcccagtgccttttcacaagaaaaagggtggcggcggcggcggcggcagcggt
cacagtcgcggaagcaggccaaaatccaagcaggccatctacgaagcgctggacgccgcc
ctgagggacatctacgagcacatccgagccgagcgtggtcacaggggcgccgggaccccc
gacgacagcatcctgaggagaatactctccgagctgctgcccaacgtgcctgaaagaagc
tcttcgttgccgggaaggaggtgttggcacgaggccggcccagacgggtacgcctcgtac
cggggcgatccactcacgccgcagttgcagtccccccgaatccggtcgccagtcagtgcc
tgttacggacgccatttggacgccaccaactgtaatgattacggggaggagcatggcaat
gagaatggtgttttatattcagaccaggatgtgcccaccagaagttattctactatggac
gggcgccgcacaccccagaatcgaagaggagctcccgagagagaggtatcccataaacag
atgacacaactcattctgttctctctcctccatcagaagcagcccgctcgagctatttac
gactttaaggcgcagacggctaaggagctgacgttcaaaaaaggcgacgcggtgaacatc
atcaggcagattgacggcaactggtacgaaggcgagcacagaggccgggtggggatattc
ccaatagcttacgtggagaagatggcgtctttggagaagccgcagcccagccgcccgcct
ccgcccgcccacgtcagggagatcggagaggccgtggctcgctacaacttcaacgctgac
accaacgtggagctgtctctcagaaagggcgaaagagtgatcgtgatccggcaggtggac
cagaactggtacgagggcaagatcccagacaccaccaaacagggcatctttcccgtagcc
tacgtggacctgctcaagcgctcgccctccaaaacctccgtccaccacctccaccacgtg
gacccccacggttacaggacatccagctccacgcccatcaaacctttctcgcatctaccc
cctccatcccccacccccgtccacgaccgcccgtccacgctgctgcgggcggtcacccac
gagtggctctccctcaccgtggacgcccctcccccccacgccctctcggccacacccgca
ccccccactccgccccctctccccggtcatctcgctctgtccgtccacaagcctctcgcc
gccgagtatccctccgacgttttagggcgtagcgcgggcgagcagtcgcccgcggcgaag
ccgagcgagtcgccgagagcggcgtcggagcccttgacgtctccgagccgctttgacgtc
cagctcagtgtcgcggacccttacgatgagctgctctctgtaattcccgatgacccggat
gggtcaccggcatgttccgccactaaacctcgatttgacaaatctcagcctgaagcaatt
gaatcaacagaacacgagtgtttgagagcccgtgtcccgaacgaaagcccagttgagtct
cagaggcctccgtcaacaagagggaaggccgttattgagttattcattcaggaagaagat
gatgaggaggaggaaggggaggctagagaggatgaggaagatgtttttacaggcagactc
ggtacacaggctgacgtctgttcccccactcgctcaccttctcctcccaccgaccccccg
tcaccttcctcgccgcgccccgtgcactctcccccggcctccccccgtcctcggccccct
cccctgcccatcttctccacgtcgcctcccgtctcgccctctccccccttgtcgcctctc
cactccccagagccactgactcccccccacactgccaggtctccctcgtccacctccccc
ccgctcctcttttcccgccgctcccccccggctgtgccccacccgggccgtaggtctccc
aagatgaaggatccagtggtgggtgggaagccgcctcgtagccccatcttgtctcggagg
cccgctagaggtcgaaggcgattagtccaagaagccctccacggcggaggagaccccttc
caggccgtgtacaactacacaccgcgtaacgaagacgagctggaactgagggagggcgac
atcatcgacgtgatggagaagtgtgacgacggatggtttgtcgggacatctcgccgaagc
aagttgtttgggaccttcccagggaactatgtgaagccgctaccgtga
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integrated database retrieval system
