Syngnathus scovelli (Gulf pipefish): 125969574
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Entry
125969574 CDS
T08785
Symbol
znf827
Name
(RefSeq) zinc finger protein 827 isoform X1
KO
K27104
zinc finger protein 827
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sscv03036
]
125969574 (znf827)
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
125969574 (znf827)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-H2C2_5
zf-C2H2_16
zf-C2H2_ZN142
zf-C2H2_6
zf-C2H2_5
zf-C2H2_15
DUF5810
Motif
Other DBs
NCBI-GeneID:
125969574
NCBI-ProteinID:
XP_049577753
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All DBs
Position
5:2163282..2201438
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AA seq
1373 aa
AA seq
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MPRRKQEQPKRLPSHVDSNDEGGPDGGAAEDEGWFGNASDTRSESSSYGDTQDELFLPRG
SSPDANHESPTGCPTPVHRASLELLGLGSGAFSPQDTVSSVVSSLYGEAASRALGKPLSS
NLRRLLEAGSLKLDAGDLLGRASRGGESPPIGLASPLTLSPSSHHAQQLSALARKLANNN
SGSASPASLAPSLTNVKQEPLDHFNSQSNGGSFVWAGVADKWPPTGRSTPSGSSLSPDSA
IQKLKAAANAVLQDKNAVSAAATTTSSTNASSVVPPLGGAGARGDDVVRFDAFNSPFSPQ
SASSTLAALSKKVSERSHGSSAPAAPADQQNSATSFLSLVSMTSSAALLKEVAARAAGNL
LTEKKEGSPLPGGGGGILQEDVKPLLDKNHKTSAPSTPNQGLDLLLPSTPKGRGKPNNQA
GSPEDGGKPFQCPVCGLVIKRKSYWKRHMVIHTGLKSHQCPLCPFRCARKDNLKSHMKVH
QHQDRGETFQCELCPFTSSRHFSLKLHMRCHQHFPRTDVKVKEELTTDTEGEGSLMGDAG
GPADSRGNRLSPLHPDARLQSSPPGEASSNHVNVKEEPLERDLSVLSPFSMGRERPRSSA
NSLDLPGAGGGVHSSPSGPTTASLFSPDITTKTATDLLMKLSAANQREALKSPFHVKEEP
KTEEALSPRPASQCQIPSSFPGTFCQDAITGSAASERPGSLKPREGSPPATNSLLSQDIN
MKVASELLIKLSENNKDGHFQKVKVKAEPMEVDPGPAEVSSPVPPPAPPPAHLLPFGTLG
PREKTEPPEHLARPQKDLFSQDISVKMASELLFKLSEKVSKANNHKDGNMVGINSPFLDE
CFRQSPFNSRSKSSSPAEAGSSTRPPFNDSEKEDGEPGNGIAKWRLNEQLYPCPVCGKVF
GRQQTLSRHLALHTEERKYKCHLCPYAAKCRANLNQHLTIHSVKLVNTDAEQIVSAVAAV
NDGAERKNCAYYYSCHVCGFQTELNAQFVGHMSLHVDKEQWMFSLCCSVCDFVCMEEGDM
KSHISTGHAGLNSRSPLSETKSTSSSLSALSDSLNSSEGGDLTHGGSGGEELKSLLAPPS
SAGSQSSSGSRSGSEDKSDKGFECVFCTFVCKTRSMYERHLQIHLITRMFECDVCHKFLK
TPEQLLEHKKCHSVPTGGLKCPFCIYSSGRPAAMECHLKTHLQTEHRCRICQGLWPDRLS
LEAHARAHRLGNHYRCERCGYLSKTANKLIEHVRVHTGERPFHCDRCPYRCKRKDNLNLH
KRLKHAPPAPPAEEGGGGAGRETPGRLAASRALRSVALTRTLGGGPRLARPPSGGDTDPY
RNCERAHLIPLTTLFTQSFTFHPPPLPAVAPSPASHKHSFMAYLGLTERAETV
NT seq
4122 nt
NT seq
+upstream
nt +downstream
nt
atgccaaggaggaagcaggagcaacccaagcgcctgccttcacatgtggacagcaatgac
gaaggagggcctgacggcggcgctgcggaggacgaaggctggttcgggaatgcatccgac
acgcgctcggagtcttcgtcctacggcgacacccaggacgagctgttcctgccgagggga
tcgtccccggacgccaaccacgagagtcccacgggctgccccacaccggtccaccgcgcc
tccttggaactcctgggactgggcagcggcgccttctcgccgcaggacaccgtctcgtcg
gtggtgtcatcgctgtacggtgaggcggcgtcccgtgccctcgggaagcccctcagcagc
aacctgcggcgcctcctggaggccgggtcgctgaagctggacgcgggggaccttctgggg
cgggcgtcccggggaggcgagtcccctcccatagggcttgcgtcgcccctaaccctctcc
ccatcttcacaccacgctcaacagctcagcgcgctcgctcgcaagctggccaacaacaac
agcggctccgcctcgccggcctcgttggcgccctcgctcaccaacgttaaacaagagccg
ctggaccacttcaactcccagagcaacggcggtagctttgtatgggccggagtcgccgac
aagtggccgcccaccggacgctccactcccagcgggtccagcctctccccggactccgcc
atccagaagctaaaagcggcggctaacgcggtgcttcaagacaagaacgccgtgtcggcc
gccgccaccaccacctcctccaccaacgcttcgtccgtcgtgccgcccctcggaggggcc
ggcgcccggggcgacgacgtggtgcgtttcgatgcctttaactctccgttcagcccgcag
tcggcgagctccactttggccgcgctttccaagaaagtcagcgagaggagccacggttcg
tcggcgcccgctgcgcccgccgaccagcagaactctgcgacgtccttcctgtcgctcgtg
tccatgacctcgtcggccgccttgctcaaagaggtggcggccagggcggcggggaacctg
ctcaccgagaagaaggaaggctcccccctgccgggcggtggcggcggcatcctccaagag
gatgtcaagcccctgctggacaagaaccacaaaacctccgcgccgtcaacacccaaccag
ggcctggatctgttgttgccctccacacccaaaggaagagggaaacccaacaaccaagca
ggctctccggaagacggcggcaaaccgttccagtgtcctgtgtgcggtctggtcatcaag
cgcaagagctactggaagagacacatggtcatccacaccggcttgaaaagccaccaatgt
ccgctgtgccccttccgctgcgcccgcaaagacaatcttaagtcccacatgaaggtccat
cagcaccaagaccggggcgagacgttccagtgcgaactctgccccttcacttcctcccgt
cacttcagcctgaagctccacatgcgctgccaccagcactttccccgcaccgacgtcaag
gtgaaagaggagctcaccaccgacaccgaaggcgagggctccctgatgggcgacgccggc
ggcccagccgactcgagggggaaccggctgtcccctctgcatccggacgcccggctgcag
tcgtccccgccgggcgaggcgtcgtccaatcacgtcaacgtcaaggaggagccgctggag
agggacctgtccgtcctgtcgccgtttagcatgggcagggagcgacctaggagcagcgcc
aactccttggacctgccgggcgcaggcggcggggtgcactccagcccaagtggtccaacc
acggcctccctcttcagcccggacatcaccaccaagacagccactgacctgcttatgaag
ctatcagcggccaaccagagggaggcgctgaagtcgcccttccacgtgaaggaagaaccc
aaaaccgaggaagccttgagtcctagaccggcctcccagtgtcaaatcccgtcgagcttc
cccgggacgttctgccaggacgctatcacggggtcggcggcttcggaacgtccggggtcc
ctcaaaccgagggaagggagccccccggctaccaacagcttattgagccaagacatcaac
atgaaagtggcctccgagttgctgatcaaactatcagagaacaacaaagatggccacttc
cagaaggtgaaggtcaaagcggagcccatggaggtggacccgggccctgccgaagtctcg
tcgcccgttcccccgcccgctcctccccctgctcacctgctgcctttcggcactttaggg
ccacgcgagaagaccgagcccccggagcatctggcgcgcccccaaaaggacctcttctcc
caagacatctcggtcaaaatggcctccgagctcctcttcaaattgtcagaaaaagtgagc
aaagccaacaaccacaaagacggcaacatggtgggaattaacagtccgttcttggacgag
tgctttcgacaatcacccttcaactcgcgctccaaaagctcctcccccgcagaggccggc
tcctccacccggccgcctttcaacgactcggaaaaggaagacggcgaaccgggcaacggc
atcgccaagtggcggctcaacgagcagctctacccgtgccccgtgtgcggcaaagtcttt
gggaggcaacagacgttatcgcgccaccttgccctacacacagaggagaggaagtacaag
tgtcatctgtgcccctacgccgccaagtgcagggccaacctcaatcagcacctgaccatc
cactccgtcaagctggtcaacacggacgccgagcagatcgtcagcgccgtcgccgccgtc
aacgacggcgccgagcgcaagaactgcgcctactattacagctgccacgtttgcggcttc
cagacggagctcaacgcccagttcgtgggccacatgtcgctccatgtggacaaggagcag
tggatgttctcgctctgctgcagcgtctgcgactttgtgtgcatggaggaaggcgacatg
aagagtcacataagcaccggccacgcaggcctgaactcgaggagtcccctgagcgaaacc
aagagcacgtcgtcctccctctcggcgctcagcgactcgctcaacagctcggagggcggc
gacctcacccacggcggcagcggcggcgaagaactcaaaagtctcctagccccgccctct
tccgccggcagccaatccagctccgggagccgctcgggctcggaggacaaatccgataaa
ggcttcgagtgtgtgttctgcacgtttgtgtgcaagacccgcagcatgtatgagcgccac
ctgcagatccacctcatcacccgcatgttcgagtgcgacgtgtgccacaagttcctgaag
acgcccgagcaactgctggagcacaagaagtgtcacagcgtccccaccggaggactcaag
tgccccttctgcatctactccagcggtcgtccggcggccatggagtgccacctgaagacg
cacctccagacggagcaccgctgtcgcatctgccagggactgtggcccgaccgcctctcc
ctggaggcccacgcgcgcgcccaccgcctgggcaaccactaccgctgcgagcgctgcggc
tacctgtccaagacggccaacaagctcatcgagcacgtgcgcgtgcacacgggcgagcgg
ccgttccactgcgaccgctgtccgtaccgctgcaagcgcaaggacaacctcaacctgcac
aagaggctcaagcacgcaccgcccgcccccccagcggaggaaggaggcggcggggcgggc
cgggagacaccgggccgactcgccgcgtcccgggcgctgcgctccgtcgccttgacccgc
accctcggcggcgggcctcgcctagcccggcccccgtcgggcggcgacacggacccgtac
aggaactgcgagcgggcgcacctgatccccctcaccaccctgttcacccagagtttcaca
ttccaccccccgcccctccccgccgtcgccccctctccagcctcccacaaacactccttc
atggcctacctgggactcacggagagggctgagactgtttga
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