Syngnathus scovelli (Gulf pipefish): 125972191
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Entry
125972191 CDS
T08785
Symbol
phldb1b
Name
(RefSeq) pleckstrin homology-like domain family B member 1 isoform X1
KO
K23794
pleckstrin homology-like domain family B
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
125972191 (phldb1b)
Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
125972191 (phldb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH
FHA
PH_11
PH_8
PH_3
Yop-YscD_cpl
DUF2193
Motif
Other DBs
NCBI-GeneID:
125972191
NCBI-ProteinID:
XP_049581593
LinkDB
All DBs
Position
7:complement(13408609..13563606)
Genome browser
AA seq
1545 aa
AA seq
DB search
MTALHLLDNCKKDIHMSQGVADIMMDMDCLNKNASESGAHTRQVLKSTPLDLIETGKGLK
FQAERPHLVSLGSGRLSVAITLLPLPEGRTTVGHGPMDINIQGPGVEAQHCYIENRSGVI
MLHPCGNLCAVDGLQVTQPIRLSQGCMLCFGQSAFFRFNHPEEALRMKSMMPPGGTVSTA
DYRRCADSESLVNGNHQGSPAQSSQEIGERIQSEHSAIVSSIEKDLQDIMDSLVMDDLES
CSSEDKKPPGGQPVTHSPLLPMVNGGGRYLLSPPTSPGAMSMGSSYDNTSPPFSPLSSPS
AASSGSFTSPSGGAPQDHISSLPPVPARSSSYNFTSHSQLVPQPRTNLPNFNGGGVGQKV
QESPRLQKKILGEAPPSPKPSRRGLCQDGLDSPRETPFLSLKESPSSRNIVPSSPGFTPK
FPTSSSMSAPMRTKTTTVLHDRPASPFREQTTFADRSITSSPSRQLCQPTKAFQPPLDPI
VHIIQGSPCQQLPESPRMIRRNIELNGGGGNMRELPPLSPSIARRGVPGLPGALPGTVQC
TTLKTPDSTSGLGTLISESPRLQRKTGPTAVDLTGSWGMRARSPSPTSLMMESGTGIRKA
NFGNSLSSAYSLGSLPGSSPMSSPRINRKVSTGGPGMRERKNSISEISDNEDELVEYHRR
QREERLREQEMERLERQRLETILNLCAEYNKGDSTSPDPLSFGKTSFPGGFSDGSVQGAS
IESILGGTLTSTSLRLAQRQRESDEENLKEECSSTESTHQEVRTSPAPCTASALLNGGQQ
HEDMASSDRMELGYLEEERVRVLSRLDELKTRLTELEQQYQESKQEAEMECALLQGERQA
ELDQIEVEMDIISQLQRKLDELEIAIQREKDKERANVEAERRALQRLQEGHAELKNQLHN
CPESLREQLQERFKRDGEALEAGTKKFEDLEFQQLERESSLEEERETMSQQLLQERAEYH
STVAKRKEKVSALENQANQLGLQASQECEHLAKDRTITLQMLQKEKDRHTALEQRYHSLT
GGKSFPKSPTTMRESEGIRHPLLKLDLEQWYQELLSGSSQLWCPSLPAKSMSGRRPALQV
FRSKLESDAGQSPHLVKSGSTQPEGAATLGRNTSSKSPLLAPQSSSSLPRNLAATMQSIE
TKRQLALQQKESRFVLTVCWAFSSDDLVNHSGVQLTDRVSPVKRVSSICLGQGLVLGRKV
SWNPEIGQQVIEEQRRRLAELKQRAAEEAQCQWEALHGLQPHLITSTPSYSPIITYSPAL
SHKSTGPPPLVQHSILHHHPASAGEQAYDTLSLESSDSMDTSVSTGNNSACSPDNLSSVG
GPEAQKIEEMEKMLKQAQMEKARLIEFREQESFTRHQMLEEERKRREEAEKRLQDETLHR
QQLVEKEVKLRAKNFSQARPMTRYLPIRKEEFDLRAHIETSGHSVDTCYHIILTEKMCKG
YLVKMGGKIKSWKKRWFVFDRLKRTFSYYMDKHETKLKGVIYFQAIEEVYYDHLRSATKS
PNPALTFCVKTHDRLYYMVAPSAEAMRIWMDVIVTGAEGYTQFLN
NT seq
4638 nt
NT seq
+upstream
nt +downstream
nt
atgacggctttgcatttactggacaattgcaagaaggatattcacatgagtcagggagtc
gcagacatcatgatggacatggactgtctgaacaagaatgcatcagagagtggtgcgcac
acccgccaggtgttaaagagcactccactggatttgattgagactggaaagggcctgaag
ttccaggcagaacgcccacatctagtcagccttggtagtggacgtctgagtgttgccatc
actttgctgcctctacctgagggccgcacaactgtaggtcatggtcccatggacatcaac
atccaaggccctggggtggaagctcaacattgctacatagaaaataggtcaggggtcatc
atgctacacccctgcgggaatctgtgtgctgttgatggactccaagtgacacaaccgatc
cgcttgtctcaaggctgtatgctgtgttttggccagtcagccttttttcgcttcaaccac
cctgaagaagccttgaggatgaagagcatgatgcccccgggaggcaccgtgtccacagcg
gactacagacgatgtgcagactcagaaagcttggtcaatgggaatcatcaaggcagtcca
gcacagtcttcccaagaaattggtgagagaatccagtcggagcacagtgcaattgtaagc
tctattgaaaaggacctccaggacatcatggactccttagtcatggatgatcttgaatct
tgttcctctgaagacaaaaagcctcctgggggccaaccggtgactcattcacccctgtta
cccatggtcaatggtgggggcaggtatttgctgtcccctcctacgagtcctggggccatg
tccatgggatccagctatgacaatacatcgccacccttctctcctctctcttctccttca
gcagccagcagtggtagctttacgagtccatctggtggagcaccccaggaccacatttct
tctctgccgccagtgcctgcacgctcctccagctacaacttcaccagccattctcaactt
gtaccccagccacggaccaacctacctaactttaatggtggcggcgtaggtcagaaggtt
caagaaagccccagactgcaaaaaaagatcttaggggaggcacccccaagcccaaagcct
agtcgcagaggattatgccaagatgggttggacagtcccagagagaccccatttttatct
ttgaaggaatcccccagtagcagaaatattgtgccaagtagccccggtttcactcccaag
ttcccaacatcctcttccatgtccgctcctatgaggaccaagacaaccacagtgcttcat
gacagacctgctagccctttcagagagcaaacaacctttgctgatcgctccatcacctca
agcccatccaggcaactctgccaacctacaaaggcctttcagccacctctcgatcccatt
gtccatatcattcaaggctcaccgtgccagcagctgccagaaagccctcgcatgattcga
cgaaacatagaactgaatggcggaggaggtaatatgagagaacttccacctctaagtccc
tccattgctcgtagaggcgtcccaggactcccaggggcccttccaggaacggtacaatgt
acaaccctgaagacacctgatagcacctcaggtctgggcacactcatctcagagagtccc
aggcttcaacgtaagactggacctacagctgttgatttgactggaagctggggaatgcga
gcccgtagtccttcacccacctctctgatgatggaaagtggcacgggaattcgaaaggcc
aactttggcaattctctttcatcagcatatagtcttggttcccttcctggctcatcaccc
atgtccagtcccagaatcaacaggaaagtatcaacagggggaccggggatgagggagaga
aagaacagcatctcagaaatcagcgacaatgaagacgagctggtggaataccatcgacga
cagagggaggagcgacttcgagagcaggaaatggagagactggagagacagcgactggag
acaatccttaatctttgtgctgagtacaacaaaggagacagcactagccccgatccactc
agctttgggaagacgagttttccaggaggattttcagatggctcagtgcagggggcatcc
atcgaaagcatccttggaggaactttgacctcaacctctttgcgtctggcacagagacag
agggagagcgatgaggagaacctaaaggaggagtgtagtagtacagaaagcactcatcag
gaggtgaggacatcaccggctccatgcacagcatctgcgctgctcaatggaggtcaacag
catgaggacatggcgagttctgatcgaatggagctgggttatctggaggaggaaagagta
cgtgttctgtcaaggcttgatgaactcaaaacccggctgacggaactggagcaacaatac
caggagtccaaacaagaggctgagatggaatgtgccttgctgcagggagagagacaggca
gaactcgaccagatcgaggtggagatggacatcatcagtcagctgcagcgcaagctagat
gagctggaaattgccattcagcgagagaaagacaaggagagggctaatgtggaggccgag
cgccgggccctacagagactccaggagggccatgctgagctgaagaaccagctgcataac
tgtcccgaatccctgcgcgaacagttgcaggaacggttcaaaagggatggagaagctctg
gaagcaggaaccaagaagtttgaagatctggagtttcaacaacttgagagagaaagcagc
ttggaggaggaaagggagacaatgagccagcagttgctacaggagagagcagagtaccac
agcactgttgccaagaggaaggagaaagtgtctgctttggaaaatcaggccaaccagttg
ggcctccaggcatctcaggaatgtgagcatctcgccaaagacaggaccatcacattgcaa
atgctccaaaaggagaaggacaggcatactgctttggagcagaggtatcacagtttaact
ggaggaaagagcttcccaaagtcccctacaaccatgagagaatctgagggcatcaggcat
ccactgctcaaactagatttagaacagtggtaccaggaactgttgtcaggttccagccag
ctctggtgtccctctctgccagccaagtctatgtctggccgcaggcccgcgctgcaggtg
ttccgctccaagctggaaagtgatgcaggacaatctcctcatttagtaaagtctggatcc
actcagccggagggagcagcaacattgggccgcaacacgagctccaagagccctcttcta
gcccctcaaagctctagcagtctgcccagaaacctggctgccaccatgcagagcatcgag
accaagagacagcttgctctgcagcagaaagaatcaagattcgtactcacagtctgctgg
gccttctcctcggatgatctcgtcaaccactccggcgtccagctgactgatcgagtcagc
cctgtgaaaagggtttcctctatatgccttggccaaggacttgtcctgggtcgaaaagtc
agctggaatcccgaaataggtcagcaggttattgaagagcagcgacgtcgtctggcggag
ctcaagcagagagccgcagaagaggctcagtgccagtgggaggcgctccatggcctgcag
cctcacctcatcacctccacgccctcctactccccaataataacctacagtcccgcactg
agtcacaagtctacaggcccccctcctctggtccaacactccatcctgcaccaccatccg
gcatcagccggagagcaggcctacgacaccctgagcttagagagctctgacagtatggac
accagcgtgtccacaggaaacaactccgcctgctcacctgataatttgtccagtgttgga
ggaccggaggctcagaagattgaagagatggagaaaatgctgaagcaggcacagatggag
aaagccagacttattgaatttcgggaacaggagagcttcactcgccatcagatgttggag
gaagagcggaaaaggagggaagaagcagaaaaaagactgcaggatgaaactctccaccga
cagcagctggtggagaaggaagttaagttgagggccaagaacttctctcaggcccgtccc
atgacacgctacctgccaattaggaaagaggagtttgaccttcgtgcccacattgagacg
tcaggccacagtgtggacacctgctaccacatcatactcactgagaagatgtgcaagggc
tacctggtcaagatgggaggaaagatcaagtcatggaagaaacgctggtttgtctttgac
cgcctcaaaagaaccttctcatactatatggacaaacatgagactaagctgaagggtgtg
atctacttccaggctatcgaagaggtttattatgatcacctccgcagcgccacaaagagc
ccaaaccccgccttgacgttttgcgtgaagacccatgaccggctctattacatggtggcg
ccctcggcagaggccatgaggatctggatggatgtgatagtcacaggagccgagggctac
actcaatttctgaactga
DBGET
integrated database retrieval system
