Syngnathus scovelli (Gulf pipefish): 125973489
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Entry
125973489 CDS
T08785
Symbol
myo1b
Name
(RefSeq) unconventional myosin-Ib isoform X1
KO
K10356
myosin I
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
125973489 (myo1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sscv01009
]
125973489 (myo1b)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125973489 (myo1b)
03036 Chromosome and associated proteins [BR:
sscv03036
]
125973489 (myo1b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sscv04812
]
125973489 (myo1b)
04147 Exosome [BR:
sscv04147
]
125973489 (myo1b)
Protein phosphatases and associated proteins [BR:
sscv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125973489 (myo1b)
Membrane trafficking [BR:
sscv04131
]
Endocytosis
Phagocytosis
Others
125973489 (myo1b)
Others
Actin-binding proteins
Myosins
125973489 (myo1b)
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
125973489 (myo1b)
Cytoskeleton proteins [BR:
sscv04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
125973489 (myo1b)
Exosome [BR:
sscv04147
]
Exosomal proteins
Proteins found in most exosomes
125973489 (myo1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
Myosin_TH1
IQ
nSTAND3
AAA_16
AAA_22
TPR_Nup160_C
Zeta_toxin
Radial_spoke_3
Motif
Other DBs
NCBI-GeneID:
125973489
NCBI-ProteinID:
XP_049583632
LinkDB
All DBs
Position
8:complement(17323707..17349165)
Genome browser
AA seq
1168 aa
AA seq
DB search
MEVKTSLLDNMIGVGDMVLLEPLSEDSFLENLKKRFDHNEIYTYIGSVVISMNPYRSLPI
YSPEKVEEYRNRNFYELSPHIYALADEAYRSLRDQDKDQCILITGESGAGKTEASKLVMS
YVAAVCGKGQEVNKVKEQLLQSNPVLEAFGNAKTVRNDNSSRFGKYMDIEFDFKGDPLGG
VISNYLLEKSRVVKQPRGERNFHIFYQLLSGASDDTLKKLKLYRDFSKYNYLSLDSAVVN
GLDDATSFRTVKNAMQIVGFMEDEIRSVLELVAAVLKLGNIEFKPESRCNDTDESRVRDK
NDLKEMCELLGIEQTVLERAFSYRTVEAKLEKVSTTLNVAQAYYARDALAKNLYSRLFSW
LVTRINESIKAQTKSRHKVMGVLDIYGFEIFEDNSFEQFIINYCNEKLQQIFIELTLREE
QEEYIREGIEWTNIEYFNNAVICDLIENNQNGIMAMLDEECLRPGTVTDETFLDKLNTVC
AEHQHFESRLSKNSKFLNDHSLPHSCFRIQHYAGKVLYCVEGFVDKNNDLLYRDLSQAMF
KANHSLIKELFPEGNPSKVNLKRPPTAGYQFKSSVGTLMKNLQTKNPNYIRCIKPNDKKA
AHIFTPSLVCHQVRYLGLMENVRVRRAGYAFRQPYGPCLERYKMLCKRTWPHWRGPAREG
VEVLMADLQVPTEEFSYGRSKIFIRNPRTLFFLEERRRQCLQDLATLIQKIYRGWKCRTH
FLLMKKSQVVVAAWYRRYAQQKKYQRIKSATTVVQSYARGWQARKLLRELKHQKRCEEAV
TTIAAYWHGTQARTELRRLKQEVRNKHAVTVIWAYWQGTQARRELRRLKEEARNKHAVSV
IWAGWQGTKARRELRKLKEEARRKHAVAVIWACWQGLKVRREYRKFFRANAGKKIYNFTI
QRIMQKYFLGVKRGLPCMSPVDKNWPARPYRFLDAAHAQLRSIFHLWRCKKYRSQFSEER
KAVYQEKLEASELFKDKKSLYPSSVSQPFKGDYLEISKNPKYQKLSNCVEEKVLLADVVN
KINRANGKGTSRILLLTKKNVVLADQKTGQVKASVALPDLISVSVSTQNDGFFALKLKEG
SASAVKGDFLLSSEHLIETITKLHHIGSTASDDGEQLDINISDEFLVQFKQDKVCVKFIQ
AATKNGNSASCKRKNNRLLEVSVPAATA
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgaaaacgtcccttctggacaacatgattggggtgggggacatggtcctcctg
gaacccttgtctgaagactccttccttgagaatctgaaaaagcgctttgaccacaatgag
atctacacttacattggcagtgtggtgatctccatgaacccctacaggtcactgcccatc
tacagcccagagaaagtggaagagtatcgcaacagaaacttctacgaacttagcccacac
atttacgctttggcggatgaggcctacaggtcactccgagaccaggacaaggaccaatgt
attctcattacaggcgagagcggggcggggaaaaccgaggccagtaagctggtgatgtca
tacgtggcagcggtgtgtgggaagggccaggaggtgaataaggtcaaggaacagctcctg
cagtccaatcccgtgttggaagcttttggaaatgccaagacagtgaggaacgacaactca
tccagattcgggaagtacatggacattgagtttgactttaaaggagatcctctcggtgga
gtcatcagcaactatctactggagaagtcccgcgtggtgaaacaacctcgaggagagaga
aacttccacatcttttatcagctcttgtccggagcctctgatgacacactcaagaaactg
aaactgtaccgggacttcagcaagtacaactacctaagcctcgattcggccgtggtgaac
gggctggatgacgccacctcgttcaggacggtcaaaaacgccatgcagattgtgggcttc
atggaggacgagatccggtcggtgctggagttggtagcggccgtcctgaagctcggcaac
atcgagttcaagcccgagtcgcggtgcaacgacacggacgagagccgcgtcagagataaa
aacgatttgaaagagatgtgcgagctgctggggatcgagcagacggtgctggaacgggcc
ttcagctaccgcacggtggaggctaaattggagaaggtgtcgaccaccttgaacgtggcc
caggcctactatgcccgagatgcccttgccaaaaatctctacagccgtttgttcagctgg
cttgttacgcggatcaatgaaagcataaaagcacaaactaaaagccgccacaaggtcatg
ggggtgctggacatctacggcttcgagatattcgaggacaacagcttcgagcagttcatt
atcaactattgcaacgagaagctgcagcagatcttcatcgagctgaccctgcgtgaggag
caggaggagtacatccgagagggcatcgagtggaccaacattgaatatttcaacaatgcc
gttatctgtgacctcattgagaacaaccaaaacggcatcatggccatgttggacgaggag
tgcctgcgtccggggacggtgacggacgagaccttcctggacaagctgaacacggtgtgc
gctgagcaccaacactttgagagccgcttgagcaagaattcaaagttcctcaacgaccac
agcttgccgcacagttgcttccgcatccagcactacgcgggcaaggtgctgtactgcgtg
gaaggcttcgtggacaagaacaatgacctcctgtatcgagacttgtcccaagccatgttc
aaggccaaccacagcttgattaaggagcttttccccgagggcaacccgagtaaagtcaac
ctgaagagaccgcccactgccggctaccagtttaaatcatcggtgggcacgctcatgaag
aacctccagaccaagaaccccaactacatccggtgcatcaagcccaacgacaagaaggcg
gcgcacattttcactccgtcgctggtttgccatcaagtgcgctacttgggcctgatggag
aacgtccgcgtgagaagagccggctacgccttccgccagccgtacgggccctgcctggag
cgctacaaaatgctctgcaagcggacctggccgcattggagaggtcccgccagggaggga
gtcgaagtcctcatggcagatcttcaagtacccactgaagaattctcctacggccgctcg
aaaatcttcatcaggaatccgcggacgttgttctttttagaggaaaggcggcggcagtgc
ctgcaggacctggccacgctcattcagaaaatctaccgcgggtggaagtgccgtactcat
ttcttgttgatgaaaaagagtcaggttgtggtcgcagcatggtaccggcgctacgcgcaa
caaaagaaataccagcggatcaagagcgccaccaccgtggtgcagtcgtacgctcgcgga
tggcaggctcgcaagctgttgagggaactgaagcatcagaagaggtgcgaggaggcggtg
accaccattgcggcttactggcacggcactcaggctcgaacggagctgcgacgcctcaaa
caagaagtgcggaataaacacgctgtgacagtaatttgggcatactggcagggaacgcag
gctcggagggagttgcggcggctgaaggaagaggccaggaacaaacacgccgtgtcggtc
atttgggccggctggcagggcaccaaggctcgcagggagctgaggaagctgaaggaagag
gccaggcgtaagcacgccgtcgccgtcatttgggcctgctggcagggactcaaggtccgt
agggaataccgaaaattcttcagggcaaacgcggggaaaaagatctacaacttcaccatt
cagagaatcatgcagaaatatttcctgggcgtgaagcgcggcttgccttgcatgtccccc
gtcgacaagaactggcctgcgcggccttaccgcttcttggatgcagcgcacgcgcaactg
cgttccatcttccacctttggcggtgcaagaaataccgaagccagttcagcgaggagagg
aaggccgtgtaccaagagaagctggaggccagcgagctgttcaaggataaaaagtctctc
tacccgagcagcgtgagccagcccttcaagggggactacttggagatcagcaagaacccc
aaatatcagaagctcagtaattgcgttgaggaaaaggttctgctggccgacgtggtcaac
aagattaacagggccaacggcaaaggtacaagtcgcatcctcctcctgacaaagaagaac
gtggtgctggccgaccagaagacgggccaagtgaaggccagcgtggctctgcccgacctc
atcagcgtttccgtcagcacgcagaacgacggattctttgcgctcaaactcaaagagggc
tcggcctcggccgtcaaaggcgactttctactcagcagcgagcacttgatcgagaccatc
accaaactgcaccacatcggctccaccgcctccgacgacggcgagcagctcgacatcaac
atctcggacgagtttctggttcagttcaaacaggacaaagtatgcgtgaagttcatccag
gcggccaccaagaacggcaacagcgcttcttgtaagcggaagaacaaccgtcttctggag
gtgtcggtgcccgccgccaccgcatag
DBGET
integrated database retrieval system
