Syngnathus scovelli (Gulf pipefish): 125975279
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Entry
125975279 CDS
T08785
Name
(RefSeq) C-C chemokine receptor type 1
KO
K04179
C-C chemokine receptor type 4
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
125975279
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
sscv04030
]
125975279
04050 Cytokine receptors [BR:
sscv04050
]
125975279
04090 CD molecules [BR:
sscv04090
]
125975279
G protein-coupled receptors [BR:
sscv04030
]
Rhodopsin family
Chemokine
CC Chemokine
125975279
Cytokine receptors [BR:
sscv04050
]
Chemokine receptors
CC Chemokine
125975279
CD molecules [BR:
sscv04090
]
Proteins
125975279
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
125975279
NCBI-ProteinID:
XP_049586555
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Position
9:complement(6762444..6765370)
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AA seq
380 aa
AA seq
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MAKSASVLSGLNESVFPVELTRPISTAVAESTTLDDMDYSLIPNDGFGVCVYEKHGASFL
PAIYCIFFILGFVGNSLVVWVLVCEIRLRNMTDVCLLNLAIADLLLVGSLPFLAYQVHDQ
WIFGDTMCKVVLGIYYIVLYSGIFFIVVMSIDRYLAIVHAVYAMRARTCFFGIIAAGVTW
VAGFLASFPELLYLKQQPDLMNATFCYAVYEPPTPDNSDSYWRVFGHMKMNILGLLIPMV
IMSFCYLQIIRRLLSCQSSKRQTIQLVVIVVAVFFICWGPYNIVVLFKALELLQVYTECK
SSQVIRLAIQITEVVAYFHSCLNPVLYVFVGRKFRRHLLRLIHRLPCGLCQLVKVFIPQQ
QSIRSDISRTTSLVERSTAV
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaagtgcttcggttctcagtgggttgaatgagagcgtctttccagtggaatta
acaaggccaatttcaacagccgttgctgaaagcacgacattggatgacatggactacagc
cttattccaaatgacggctttggggtgtgtgtgtacgagaagcacggagcttcttttctt
ccagctatctactgtatatttttcatcctgggttttgttggcaactctttggttgtctgg
gtcctcgtctgcgagatacgacttcgcaacatgacggacgtctgcctcctgaacttggcc
atcgctgacctcctgttggtcggttccctaccattcctggcctaccaagttcatgaccag
tggatatttggggacactatgtgcaaagtggtcctgggtatttactacatagttttatat
tcaggcattttttttatcgtggtaatgagcatcgacaggtatttagcgatcgtccatgct
gtttacgccatgagggcacgcacgtgcttctttgggataattgctgcaggcgtcacatgg
gtagctggatttttggcctcttttccagagctcctctacctaaaacagcaacctgacctc
atgaacgccacgttctgctacgctgtgtatgaaccacccactccggacaactccgatagt
tactggcgtgtttttggtcacatgaaaatgaacattttaggattactcattcccatggtc
attatgtccttttgctacttgcaaattatcaggcggctgctttcctgccagtcgtctaaa
aggcagaccatccagttggtggtcattgtggtggctgtttttttcatatgctgggggccc
tacaacatagtggtgttgttcaaagcgctggaactcctgcaagtctacacggagtgcaaa
agcagccaagtcatcagattggccatacaaatcactgaggtcgtcgcctactttcacagc
tgcctcaaccctgtgctgtatgtttttgtgggccggaagttcaggaggcacctgctcagg
ttgatccacagacttccatgtggtttgtgccagcttgtcaaggtcttcataccacagcaa
cagagcatcaggtccgatatctcccgaaccaccagcttggttgagaggagcactgctgtg
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