Syngnathus scovelli (Gulf pipefish): 125976805
Help
Entry
125976805 CDS
T08785
Symbol
thoc7
Name
(RefSeq) THO complex subunit 7 homolog
KO
K13176
THO complex subunit 7
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125976805 (thoc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sscv03019
]
125976805 (thoc7)
03041 Spliceosome [BR:
sscv03041
]
125976805 (thoc7)
Messenger RNA biogenesis [BR:
sscv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
125976805 (thoc7)
Spliceosome [BR:
sscv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
125976805 (thoc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC7
OVT1
UPF0242
BRE1B
BORCS7
OSTMP1
Suppressor_APC
COG6_N
Sec8_N
DUF4407
Peptidase_S10
Motif
Other DBs
NCBI-GeneID:
125976805
NCBI-ProteinID:
XP_049588659
LinkDB
All DBs
Position
11:complement(6345014..6346775)
Genome browser
AA seq
204 aa
AA seq
DB search
MMGSVTDDEVIRKRLLIDGDGAGDDRRINLLLKTFTKWCNSPGSPEESFAQYQRMLGTLA
QCEFSLGKTLMVYDMNLKEMENYGKIYSNIEQNITSAHEKIVECKKEIQRAKRVRKNRQE
YDALAKVIQNHPNRHETLKQLEALDKELQQLSNIKENVDAKLELRKKQFHVLLSTIQELQ
QTLENDEKLDIDENNQPSPSEAVE
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgatggggtctgttacagatgatgaagtcattcgaaagcgtcttcttatcgacggcgat
ggagcaggggatgatcggagaatcaatttgttgttgaaaaccttcaccaagtggtgcaat
tcacctggaagcccagaagaaagcttcgcacagtaccagaggatgcttgggactcttgcc
caatgtgaattctccctggggaagacgctaatggtctatgatatgaatctgaaggaaatg
gagaattatggcaaaatctactctaatatagaacaaaatataacgtcagcacatgagaag
attgtggaatgcaaaaaggaaatccagagagcaaagagagtaagaaagaaccgccaagaa
tacgatgcgcttgcaaaggttattcagaatcacccaaatcgtcacgaaacactcaagcaa
ttggaggcacttgacaaagaactccaacagttgtctaacatcaaggagaatgtggatgca
aagttggaactacggaagaagcagttccacgtgctactcagtaccattcaggagctacag
cagacacttgaaaatgatgagaaattagacattgacgaaaacaatcagccaagtccgtca
gaggctgtcgaatga
DBGET
integrated database retrieval system
