Syngnathus scovelli (Gulf pipefish): 125979357
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Entry
125979357 CDS
T08785
Symbol
nars1
Name
(RefSeq) asparagine--tRNA ligase, cytoplasmic isoform X1
KO
K01893
asparaginyl-tRNA synthetase [EC:
6.1.1.22
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
125979357 (nars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sscv01007
]
125979357 (nars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sscv03016
]
125979357 (nars1)
Enzymes [BR:
sscv01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.22 asparagine---tRNA ligase
125979357 (nars1)
Amino acid related enzymes [BR:
sscv01007
]
Aminoacyl-tRNA synthetase
Class II (A)
125979357 (nars1)
Transfer RNA biogenesis [BR:
sscv03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
125979357 (nars1)
Prokaryotic type
125979357 (nars1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
AsnRS_N
tRNA_anti-codon
AIM3
Motif
Other DBs
NCBI-GeneID:
125979357
NCBI-ProteinID:
XP_049593434
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All DBs
Position
13:complement(7872665..7879195)
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AA seq
559 aa
AA seq
DB search
MATDITKGVDQLSVGEMYVSDKCGSDQDGDGTEQKPFKTPLKALLFIGKEPFPTIYVDSQ
KEEERWVAISKTQMKSAKKAFNREQAKNESKEKKEAEDNERREKNLEEAKKIMIEKDPSL
PDPETVKIYNLGSKRGQRVKVFGWVHRLRRQGKNLMFIVLRDGTGFLQCVLSDKLCQCYN
GLLLSTESSVALYGTVTPVPEGKQAPGGHELHCDFWELIGLAPAGGADNILNEESDVDVQ
LNNRHMMIRGENVSKVLKVRSTVTQCFREHFFSRGYYEVSPPTLVQTQVEGGSTLFNLNY
FGEQAYLTQSSQLYLETCIPALGDCFCVAQSYRAEQSRTRRHLSEYTHIEAECPFITFDD
LLNKLEDLVCDVVDRVLKSPAAQLLYDINPDFKPPKRPFKRMNYSDAIVWLKEHDVKKDD
GTYYEFGEDIPEAPERLMTDAINETILLCRFPAEIKSFYMQRCAEDRRLTESVDVLMPNV
GEIVGGSMRTWDAEELLDGYKREGIDPTPYYWYTDQRKYGTCPHGGYGLGLERFLTWLLN
RHHIRDVCLYPRFIQRCRP
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggctacagatataaccaaaggtgtggaccaattgtctgttggggaaatgtatgtgtcg
gacaaatgtggcagcgaccaggatggagatgggaccgagcagaaacctttcaagacacct
ctcaaggctctgctcttcattggcaaagaaccattccctactatctacgtagactcacag
aaagaagaagagcgttgggtcgcaatctccaagactcagatgaagagtgcaaagaaagct
tttaaccgtgaacaggccaagaatgaatccaaggagaagaaagaggcggaagacaatgag
aggcgagagaagaacctggaagaagccaagaaaatcatgattgaaaaggaccccagtttg
cccgatccggaaacggtaaaaatctacaatctgggatcaaagcgaggtcagagagtcaaa
gtgtttggatgggttcatcgtcttaggagacaaggcaaaaacttgatgtttatcgtgcta
agagatggaactggtttcctgcagtgtgtgctgtctgataaactgtgtcagtgctataat
ggcttattgttgtccacggagagcagtgtagctctttatgggactgtgacaccagttcct
gaaggaaaacaggcaccaggaggccacgagctccactgcgacttctgggagctgatcggc
ctggcgccagcaggcggggccgacaacatcttgaatgaagagtcggacgtggatgtccag
cttaacaaccgacacatgatgatccgaggagagaacgtttccaaggtcctcaaagtccga
tctacggtcacacagtgcttcagggaacacttcttcagccgtggttactacgaggtcagt
cctccaactttggtgcagactcaggtggagggcggctccacgctgttcaacctcaactac
tttggcgagcaggcttacctgacacagtcatcccagctttacctggagacatgcatacct
gcgctgggcgactgcttctgcgtcgctcagtcataccgagctgaacagtcccgcacccgc
aggcacctctcagagtatactcacattgaagcagaatgtcccttcataacctttgacgat
ctgctgaacaaactggaggatttagtgtgtgatgttgtggaccgagtgctaaaatctcct
gctgcgcaactgctctatgacatcaacccggacttcaaaccccctaaaaggccattcaag
aggatgaactactccgatgccatcgtgtggctcaaagaacatgacgtcaagaaggatgat
ggcacctactatgagtttggagaggacatcccagaggcccccgagaggctgatgacagat
gccatcaatgaaacaattctgctttgtcgcttcccagctgagatcaaatccttctacatg
cagcgctgcgctgaggacaggcggctcacagaatcggttgacgttttgatgccaaatgtg
ggtgagattgttggtggctcgatgcgtacctgggatgctgaggagctgttggatggctat
aagagggaaggcatcgacccaaccccgtactattggtacactgatcagaggaagtatggc
acgtgtcctcatggcggttatggcctcggtctcgagcgtttcctcacctggctgctgaac
agacaccacatcagagacgtctgcctttacccacgattcatccaacgctgccggccctaa
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