Syngnathus scovelli (Gulf pipefish): 125979800
Help
Entry
125979800 CDS
T08785
Symbol
tln1
Name
(RefSeq) talin-1
KO
K06271
talin
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04510
Focal adhesion
sscv04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125979800 (tln1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
125979800 (tln1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sscv04147
]
125979800 (tln1)
Exosome [BR:
sscv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125979800 (tln1)
Exosomal proteins of other cancer cells
125979800 (tln1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Talin_IBS2B
TLN1-like_RS
Talin_VBS2
Talin_middle
VBS
I_LWEQ
Talin_R4
FERM_f0
IRS
FERM_M
FERM_N
RA_2
ACBP
PH_SLA1
DUF7783
GIT1_C
Motif
Other DBs
NCBI-GeneID:
125979800
NCBI-ProteinID:
XP_049594388
LinkDB
All DBs
Position
13:complement(4561993..4673970)
Genome browser
AA seq
2541 aa
AA seq
DB search
MVALSLKIGVGNVVKTMQFEPSTMVYDACRIIRERVTEAQLGQPNDYGLFLSDEDPKKGI
WLEAGKALDYYMLRNGDTLEYKKKQRPLKIRMLDGTVKTVMVDDSKIVSDMLMTICARIG
ITNYDEYSLVRDVGEEKKEENTGTLKKDKTLLRDDKKMEKLKQKLHTDDELNWLDHGRTL
REQGVEETEMLLLRRKFFYSDQNVDSRDPVQLNLLYVQARDDILNGSHPVSFDKACEFAG
YQCQIQFGDHNESKHKPGFLDLKEFLPKEYIKHKGEKKIFQEHKKCQNMTEIEAKVNYVK
QARSLETYGVSFFLVKEKMKGKNKLVPRLLGITKEFVMRVDEKTKEVIQKWNLTNIKRWA
ASPKSFTLDFGDYQDGYYSVQTTEGEQIAQLIAGYIDIILKKKKSKDHFGLEGDEESTML
EDSVSPKKSTVLQQQFNKVGKVETGSVALPAIMRSGAGGPESFQMGSMPQAKQHITSGQM
HRGHMPPLTSAQQALTGTINSSMHAVQAAQASLDDFDTLPPLGTDAASQAWRKNKMDESK
HEIHSQVDAITAGTASMVNLTAGDPAETDYTAVGCAVTTISSNLTEMSKGVKLLAALMED
EGGNGQQLLGAAKHLACAVSDMLKTAQPANIEPRQNLLQAAGNVGQASGELLSHIGETDT
DPQFQDMLMQLAKAVANAAAALVLKAKNVAQKTEDSMQQNRVIAAATQCALSTSQLVACT
RVVAPTISSPVCQEQLIEAGKLVAKSVEGCVDASQGATNDEGLLKQVGVAATSVTQALNE
LLQHIKQYASGGHPIGRHGEATDRILDVTENIFSSMGNAGEMVRQARILAQATSDLVNAI
KMDAEGESDLENSRKLLSAAKLLADATAKMVEAAKGAAANPDSEEQQQRLREAAEGLRMA
TNAAAQNAIKKRLVNKLENAARQAAAAATQTIAAAQHAASSNKNQAAQQQLVQSCKVVAE
QIPQLVQGVRGSQSQPDSPSAQLALISASQNFLQPGAKMVTASKATVPTISDQASAMQLS
QCAKNLASALAELRTASQKAQEACGPLEIDNALSVVRRLEKDIQDAKASADEGKLKPLPG
ENLEKCSQDLGTSTKAVNSAIAQLLSEATQGNENYTGMAARDVAQALKSLASAARGVAAT
TDDAGARAALLDCASDVMDKSGNLIEETKKAIAKPGDAESQQRLAQVAKAVSQALNRCVN
CLPGQRDVDNAIRTVGEASKCLLADSFPSSGRSFQEVQAQLNEVAANLNQSANEVVQASR
ATTQDVARATGKFGQDFSNFLEAGIDMAGTSQSKEDKIQVVSNLKTISMSSSKLLLSAKA
LSTDPNSPNLKNQLAAAARAVTDSINQLITMCTQQAPGQKECDNALRELESVRGMLENPT
EAVNELSYFDCIDSVMENSKILGESMAGISHNAKNSNLPEFGDSVSSGSKALCGLTEAAA
QAAYLVGVSDPNSSAGQKGLVDPAQFARANQSIQMACQNLVDPGCTQSQVLSAATIVAKH
TSALCNACRLASSKTPNPVAKRQFVQSAKEVANTTANLVKSIKALDGAFNQENREKCKAA
TGPLIEAVDNLTAFASNPEFASIPAQISPEGHAAMEPIIAAAKTMLESSTGLIQTARSLA
VNPKDPPKWSVLAGHSRTVSDSIKKLITNMREKAPGQRECDDAIEVLNGCIREVDHASLA
AISQQLTPREDISMEALHEQMAASVHEISNLIEPVAVAARSEASQLGHKVSQMVSYFEPL
IMAAIGTASKILSSQQQMAVLDQTKTLTESALQMLYTAKEAGGNPKAAHMQEALEESVQM
MKEAVDDLGTTLAEAASAAGAVGGMVDSINDAINKMEDAPTLEPEGTFVDYQTTMVKTAK
AIAVTVQEMVTKSNTNPDDLGGLANQLTNEFGNLANEAKYAAITAENDEIGSHIKKQVGE
LGFSCTSLVTKAGALQCSPSDSFTKKELIESARKVSEKVSHVLAALQAGNRGTQACITAA
SAVSGIIADLDTTIMFATAGTLNRENAETFADHREYILKTAKALVEDTKLLVSGAGASQE
KLAQAAQSSVHTITKLADVVKLGAASLGSEDPETQVVLINAVKDVAKALGNLISTTKAAA
GKPHDDPSMLHLKNSAKVMVTNVTSLLKTVKAVEDEATKGTRALEATIEHIRQELATFSS
SDPPAKTTTPEEFIRMTKGITMATAKAVAAGNSCRQEDIIATANLSRRAIADMLHSCKQA
AYHSEVNKEVRTRALRYGNECATGYLGLLEHVLVIIQKPSYDLKQQLANYSKRVAGSVTE
LIQAAEAMKGTEWVDPEDPTVIAENELLGAAAAIEAAAKKLEQLRPRTKPKEADESLNFE
EQILEAAKSIAAATSALVKAASAAQRELVAQGKVGAIPANAVDDGQWSQGLISAARMVAA
ATNNLCEAANSAVQGHASEEKLISSAKQVAASTAQLLVACKVKADQDSQSMKRLQAAGNA
VKRASDNLVKAAQKAAFDAQDDQAVVVKSKMVGGIAQIIAAQEEMLRKERELDEARKRLA
MIRQQQYKFLPSELREDGQEQ
NT seq
7626 nt
NT seq
+upstream
nt +downstream
nt
atggtggccttgtcattaaagattggtgtgggcaatgttgtcaagacaatgcagtttgag
ccctccaccatggtgtatgatgcctgtcgcatcatcagggagagagttacagaggcacaa
cttggacagcccaatgactatggactgtttctctctgatgaagaccccaaaaaaggcatt
tggctagaggctggaaaagccctcgactactacatgttgagaaatggggacactctggag
tacaagaaaaagcagaggcctctgaagatccgtatgcttgatggcaccgtgaagaccgtc
atggtggatgattccaaaattgtcagcgatatgctcatgactatttgtgccagaataggc
attacaaactatgacgagtactcactggtgcgagacgttggtgaagagaagaaggaggag
aacacaggcacgcttaaaaaagacaaaacactgctccgagatgacaagaagatggagaag
ttaaagcagaagctccatacagatgatgaattaaactggttggaccatgggcgaactttg
agagaacaaggtgttgaggagacagaaatgttgttgctgaggaggaagttcttctattca
gatcagaatgttgactccagagaccccgtacaactcaaccttctctatgtacaggcccgc
gatgacattctaaatgggtctcatccagtctcctttgacaaagcctgtgagtttgccggt
tatcaatgtcagatccagtttggtgaccacaacgagtctaaacacaaacctggattctta
gatttaaaagagtttcttcccaaagagtacatcaaacacaaaggagagaaaaagatcttc
caggaacacaaaaagtgccaaaacatgacagagattgaggccaaagtcaactatgtgaag
caagccaggtctcttgaaacctatggagtgtcgttttttttggtcaaggagaaaatgaaa
ggcaagaacaaactggttccacgtcttttgggcatcaccaaagagtttgtgatgagggtg
gatgagaaaacaaaggaggtgattcagaaatggaacttgaccaatatcaaacgttgggct
gcttcacctaagagtttcactctggactttggagactatcaggatggttactactcagtg
cagaccaccgagggagagcaaattgcacagcttattgctggttacattgacatcatcctt
aagaagaaaaaaagcaaagatcactttgggctggagggagatgaagagtcaacaatgttg
gaggactctgtgtcccctaaaaagtccacagtgttgcagcagcagttcaacaaagtgggt
aaagtagaaacaggctctgtggctctgccagccattatgcgctcaggagccggtggtcca
gagagtttccagatgggctccatgccccaggccaaacagcacatcaccagtggacaaatg
cacagaggacacatgcctcctctgacttcagctcagcaagccctgaccggtaccatcaac
tccagtatgcatgctgttcaggctgctcaggcctctttagatgactttgataccctgcct
cccctggggacagatgctgcatcccaagcctggcgcaaaaacaagatggacgagtctaaa
catgagatccattctcaggtggatgctattacagcaggcactgcctctatggttaatctc
actgcaggtgacccagcagagacagactacacagcagtgggctgtgccgttaccaccatc
tcctccaatctcactgagatgtcaaagggtgtcaaactattggcagcactcatggaggat
gaaggaggaaatggacaacagctgctcggtgccgccaagcacttggcctgtgctgtctct
gacatgctgaagactgcgcagcctgcaaacatagagcctcgtcagaatctgctgcaagct
gcaggaaatgtgggtcaggccagtggagaactactatctcacattggagagacagacact
gatccacagttccaggatatgctgatgcagctggctaaagctgtggctaatgctgcagca
gcccttgtgctcaaagctaaaaacgtggcccagaagacagaggactcaatgcagcagaat
agagttattgctgcagccacccagtgtgctttgtccacatctcagctggtggcctgcaca
agagttgtggctccaaccatcagctccccagtgtgccaggaacagttgattgaggcaggc
aagctagtggccaagtcagtggaaggttgtgtggatgcctcacagggggccacaaatgat
gagggcctcctgaagcaggtgggagtggctgcaacaagcgtcactcaggcattaaacgag
ctactccaacatattaaacagtacgctagtggaggccatcctattgggcgccacggagaa
gccactgatcgcattttggatgtcacagagaacatcttcagctcaatgggaaatgccggt
gagatggttcgccaggctcgtatccttgcccaggccacgtctgatctggtcaatgccatc
aagatggatgcagagggagagtcagacttggaaaattcaagaaaactcctgtcagctgcc
aagcttctagctgatgctactgccaagatggtggaggcagccaagggtgctgcagcaaac
cctgacagtgaggagcagcagcagaggttgcgagaagcagcagaaggtctccgcatggca
acaaatgctgcagcacagaatgccatcaaaaaacgtttggtcaacaagcttgaaaatgct
gcaaggcaagcagctgcagcagctactcagacaatagctgcagcccagcatgctgcttca
tccaacaagaaccaagctgcccagcagcagctagtccaaagctgcaaggtggttgcagag
cagattcctcagttggttcaaggagtccgaggcagccagtctcaacctgacagccccagt
gctcagttggccctcattagtgcaagccagaacttcctgcagcctggtgcaaagatggtc
acagcctccaaagccacagttcccactattagtgaccaggcatctgctatgcagctcagc
cagtgtgcaaagaacctggcaagtgctttggctgaactacgcactgcttcacagaaggcc
caagaggcgtgtggcccactggagatagacaatgctctgtcagttgtgagacgtttggag
aaggatattcaggatgccaaagcgtcagctgatgaaggcaaactcaagcccctaccaggc
gagaatcttgagaaatgctcccaggacctcgggaccagtactaaagcagtaaactcagcc
atagcccaattgctaagcgaggccactcagggcaatgagaactatacaggtatggctgcc
agagatgtagcccaggctctgaagtccttggcctcagcagcaagaggagttgctgccacc
acagacgacgcaggagcacgtgctgctctgctggactgtgccagtgatgtcatggataag
tcaggcaacttaattgaggagacaaagaaggccatcgccaaaccaggagatgcagagagt
caacaaaggctggcccaggtggctaaagcagtgtctcaagccttgaacagatgtgtgaac
tgccttcctggccagagagacgtggacaacgccattcgtacagtgggtgaagccagcaaa
tgtctactggctgattctttcccatctagtggaaggagtttccaggaggttcaagctcag
cttaatgaagtggcagccaatctgaaccagtcagccaatgaggttgtccaggcgtctcga
gcaaccacccaagacgtggccagagccaccggcaagttcggacaggatttcagcaacttc
ctagaggctggcattgacatggcaggaacatcacaatctaaagaggacaagatacaagtg
gtgtccaacctgaagactatctcaatgtcatcgagcaaactactgctttcagccaaagca
ctatctactgaccccaactcccccaacctcaagaaccagctagcagctgccgctcgggca
gttacagatagtatcaaccagctcataactatgtgcactcagcaagctccaggtcagaag
gagtgtgacaacgccctcagagagctggagtctgtgagggggatgctggagaacccaacc
gaagccgtcaatgagctctcctacttcgactgcatcgacagtgtcatggaaaactccaag
atccttggtgaatctatggccggtatttcccacaatgccaagaattccaacctgccggaa
tttggtgattcagtcagttcaggttccaaagctttatgcggtttgactgaagctgcagca
caggctgcctatctggttggggtatcggaccccaacagttcagcaggtcagaagggtctg
gtggatcctgctcagtttgcccgtgctaaccagtcaatccagatggcctgccagaacttg
gtggacccaggctgtactcagtcacaagtgctctctgcagccaccattgttgccaaacac
acatctgcactatgtaatgcttgccgcctggcttcctctaaaactcccaatcctgttgct
aagaggcaatttgtccagtcagctaaagaggtggccaacacaactgccaacttagtgaag
tcaattaaggctttggatggagcattcaatcaagagaacagagaaaagtgtaaggctgcg
actggtcccctgattgaagcagtggacaatttaactgcatttgcctccaacccagaattt
gctagcattccagctcagatcagtcctgagggtcacgctgccatggagcccatcatagct
gcagcaaagactatgctggaaagttctactggccttatccagactgcacgctctttggct
gtcaaccccaaagaccctcccaagtggtctgtgcttgcaggacactcgagaactgtatct
gactccatcaagaaactcataaccaacatgagagaaaaggctcctggccagagggagtgt
gacgatgctatcgaggttctgaatggctgcatccgtgaggttgaccatgcttctcttgct
gccatcagccagcaattaacacctcgagaagatatctctatggaggcccttcatgagcag
atggctgcctccgttcatgagattagcaatttgatagaaccagttgctgtggctgctcgc
tctgaggcctcacaattgggccacaaggtgtctcaaatggtcagttactttgaacccctc
ataatggcagctataggcacggcgtcgaagatccttagcagccaacagcagatggctgtc
ttagaccaaactaaaactctaacagaatcagccctgcagatgctctacactgccaaggaa
gctggaggaaaccccaaggcagctcacatgcaagaggcgctggaggaatccgtacagatg
atgaaagaagcagtagatgatttgggcaccactctggctgaggccgccagtgcggctggc
gctgtgggtggcatggtggactccatcaacgatgccatcaataagatggaagatgcgcct
acacttgaacctgagggcacctttgtggactaccagacaacaatggttaagacggccaag
gccattgctgtcactgtgcaggagatggtgaccaagtccaacacaaaccccgatgacctt
ggcggactggccaatcagctgacaaatgagtttgggaatctggcaaatgaggccaaatat
gcagctataacggcagaaaatgatgagattggttctcatataaagaagcaggtgggtgaa
ctgggtttcagctgcaccagtctagtgaccaaagctggagccctgcagtgcagccccagt
gattcattcaccaagaaggaactgattgaaagtgctcgcaaagtctcagaaaaggtctcg
catgtactggcagccctgcaggcaggtaaccgtggcacccaggcttgcatcactgcagcc
agcgctgtgtctggaatcatcgctgatcttgacaccaccatcatgtttgccactgctggg
acactaaacagagagaatgcagaaacctttgcagaccacagagaatacatcctaaagaca
gctaaggctctagtggaggacaccaaacttttagtatctggtgctggagccagtcaagaa
aaactggcccaggctgcccaatcctctgtgcatacgattaccaaacttgctgatgtggtc
aaactcggagctgcaagccttggttccgaagatccagagactcaggtggtccttatcaat
gcagtgaaagatgtggccaaagctttgggcaacctcatcagcaccaccaaagcagctgca
ggcaaacctcatgatgatcccagtatgctccatcttaagaattctgccaaggtgatggtg
actaatgttacatcactcttgaagacggtaaaggctgttgaggacgaagccacgaagggg
accagagctttggaagccactattgaacacatcagacaggagcttgctactttcagcagc
tcagacccaccagcaaagacaaccacacctgaggagttcattcgcatgactaaaggaatc
accatggcaacagctaaggcagtggctgctgggaactcttgccgccaagaggacattatt
gccactgctaatcttagcagaagggccattgctgacatgctacactcctgcaagcaagct
gcctaccattcggaagtcaataaggaggtccggacgagagccctgcgctatggaaacgaa
tgtgcaacaggatatctgggactcctggagcatgtgctagttattatccagaagccctca
tatgatttgaagcagcagttggccaactattccaaaagggttgcaggctctgtcactgag
ttgatccaggctgcagaagccatgaaaggcacagaatgggtggatcctgaagatcctact
gttattgctgagaatgagctgcttggagcagcagcagccattgaagcagctgccaagaaa
ctggagcagctgagacccaggaccaaacccaaggaagcagatgagagcttgaactttgag
gagcagattctagaggccgccaagtcgattgccgccgccaccagtgctctcgtcaaagct
gcttcagcggcacagagggagttggtggctcaaggaaaggtgggagctattccagccaat
gcagtggatgatggacagtggtctcagggtctgatttctgctgctcgaatggtagctgca
gctaccaacaatctttgtgaggctgccaactcagcggttcagggacacgcaagtgaggag
aagctcatatcttctgccaagcaggtggcagcctccactgctcagcttttggtggcctgc
aaggtcaaggctgaccaagactctcagagcatgaagaggcttcaggctgctggtaatgct
gtgaagagagcttccgataacctggtgaaggcagcacagaaagcagcgtttgatgctcag
gatgaccaagcagtggtggtcaagagcaagatggtcggaggtattgctcagatcatcgct
gcacaagaggaaatgcttcgcaaagaaagggagctggatgaggccaggaagaggctagct
atgatcaggcaacagcagtataagtttctaccctcagagctgcgggaagatggtcaggaa
cagtga
DBGET
integrated database retrieval system
