Syngnathus scovelli (Gulf pipefish): 125981977
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Entry
125981977 CDS
T08785
Symbol
cdx1b
Name
(RefSeq) homeobox protein CDX-1b
KO
K09312
homeobox protein CDX1/4
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125981977 (cdx1b)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
125981977 (cdx1b)
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SSDB
Ortholog
Paralog
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GFIT
Motif
Pfam:
Homeodomain
Caudal_act
Homeobox_KN
SR-25
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
125981977
NCBI-ProteinID:
XP_049598054
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All DBs
Position
15:34949..38851
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AA seq
284 aa
AA seq
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MYVGYLQLDKDPSMYHQNPGSRHPGLGLSPQHFPMPGPAQYSDFAGYHHPHPHAPHGLAA
DPHLQAQQNAPGSGAGWSPAYPAPPPPPLPHPPPHPVQPTRDEWAAHHYVAAGGPNLGFS
PPEFAGQPPPPPPTLLSASLNASAGQGSTGSPQRRNAYEWIRRASTPLANPNGKTRTKDK
YRVVYTDHQRLELEKEFHYSKYITIRRKAELASALSLSERQVKIWFQNRRAKERKISKKK
QQQQPASSSSSGSVAMVTSSSSGLVSPSGLVSPSSLSISIKEEF
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtgggctacctgcagctggacaaggacccctccatgtaccaccagaaccccggc
agcagacatccgggtctcggcctcagcccgcaacactttccgatgcccggcccggcccag
tactcggactttgcgggctaccaccacccccacccccacgcccctcacggcctcgcggca
gacccccacctgcaggcccagcagaacgcacccggcagcggggccggctggagcccggct
tacccggccccgcctccgcctcctctccctcatccgcctcctcaccccgtgcagcccacc
cgtgacgagtgggcagcgcatcactacgtggccgccggaggccccaaccttggcttcagc
cctccagagtttgccgggcagccgccgccaccgcccccaacacttctgtccgcctccctc
aacgcatcggccgggcaaggctcgaccggatccccgcagcggaggaacgcctacgagtgg
attcgacgcgcctccacgccgctcgccaaccccaacgggaagacacggacaaaggacaag
taccgtgtggtctacacggaccaccagcgtctggagctggagaaggagttccactacagc
aagtacatcaccatccgcaggaaagcggagctcgccagcgccctcagtctatcagagcga
caggtgaagatctggttccagaaccggcgtgccaaagagcgcaagatcagcaagaagaag
caacagcagcagcccgcctcgtcgtcgtcctccggcagcgtcgccatggtgaccagcagc
agcagcggcctggtgtctccgtccggcctggtgtcgccgtcctcgctgtccatcagcatc
aaagaagagttttga
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