Syngnathus scovelli (Gulf pipefish): 125982660
Help
Entry
125982660 CDS
T08785
Name
(RefSeq) polyubiquitin-C isoform X1
KO
K08770
ubiquitin C
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03320
PPAR signaling pathway
sscv04120
Ubiquitin mediated proteolysis
sscv04137
Mitophagy - animal
sscv04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125982660
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125982660
04137 Mitophagy - animal
125982660
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
125982660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sscv04121
]
125982660
Ubiquitin system [BR:
sscv04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
125982660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
TBK1_ULD
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
125982660
NCBI-ProteinID:
XP_049599503
LinkDB
All DBs
Position
15:complement(4104415..4106988)
Genome browser
AA seq
609 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGQ
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaagaccctcactggcaagaccatcacccttgaggttgagcccagt
gacaccattgaaaatgtcaaggccaagatccaggacaaggaaggcattccccctgaccag
cagaggttgatcttcgctgggaagcagctagaagatggccgcaccctgtccgactacaat
atccaaaaggagtccaccctccatcttgtcctgcgtctgaggggtggcatgcagatcttc
gttaagaccctcacagggaagaccatcacccttgaggttgagcccagtgacaccattgag
aatgtcaaggccaaaatccaggacaaagaaggcattccccctgaccagcagaggctgatc
tttgctggcaagcagctagaagatggccgcaccctctctgactacaacatccagaaagag
tccaccctccatcttgtcctgcgtctgaggggtggcatgcagatcttcgttaagaccctc
acagggaagaccatcacccttgaggttgagcccagtgacaccattgagaatgtcaaggcc
aaaatccaggacaaggaaggcattccccctgaccagcagaggttgatctttgccggcaag
cagctagaagatggccgcaccctctctgattacaacatccagaaagagtccaccctccat
cttgtcctccgtcttagaggtggtatgcagatcttcgtgaagaccctcacaggcaagacc
atcacccttgaggttgagcccagtgacaccattgagaacgtaaaggccaaaatccaggac
aaggaaggcattccccctgaccagcagaggctgatctttgctggcaagcagctagaagat
ggccgcaccctctctgactacaacatccagaaagagtccaccctccatcttgtcctgcgt
ctgaggggtggcatgcagatcttcgttaagaccctcacagggaagaccatcacccttgag
gttgagcccagtgacaccattgagaatgtcaaggccaaaatccaggacaaggaaggcatt
ccccctgaccagcagaggttgatctttgccggcaagcagctagaagatggccgcaccctc
tctgactacaacatccaaaaagagtccaccctccatcttgtcctgcgtcttaggggtggc
atgcagatcttcgttaagaccctcacagggaagaccatcacccttgaggttgagcccagt
gacactattgagaatgtcaaggccaagatccaggacaaggaaggcatcccccctgaccag
cagaggttgatctttgctggcaagcagctggaagatggtcgtaccctctctgactacaac
atccagaaggagtccaccctccatcttgtcctgcgtttgcgtggtggcatgcagatcttc
gtgaagaccctcactggcaagaccatcacccttgaggttgagcccagcgacaccattgaa
aatgtcaaggccaagatccaggacaaggaaggcattccccccgaccagcagaggttgatc
ttcgctggcaagcaactggaagatggccgcaccctctctgactacaacatccagaaagag
tccacactccatcttgtcctgcgtttgcgtggtggcatgcagatcttcgtgaagaccctc
actggcaagaccatcacccttgaggttgagcccagtgacaccattgaaaatgtcaaggcc
aagatccaggacaaggaaggcattccccccgaccagcagagattgatcttcgctggcaag
caactggaagatggccgcaccctgtcagactacaacatccagaaggagtccaccctccat
cttgtcctgcgtttgaggggtggccagtaa
DBGET
integrated database retrieval system
