Syngnathus scovelli (Gulf pipefish): 125982687
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Entry
125982687 CDS
T08785
Symbol
sema4f
Name
(RefSeq) semaphorin-4F isoform X1
KO
K06521
semaphorin 4
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
sscv04090
]
125982687 (sema4f)
CD molecules [BR:
sscv04090
]
Proteins
125982687 (sema4f)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sema
Sema4F_C
PSI
Ig_5
Motif
Other DBs
NCBI-GeneID:
125982687
NCBI-ProteinID:
XP_049599614
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Position
1:30062520..30073091
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AA seq
774 aa
AA seq
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MTSAGVMFACLPVCCLLLGTSRAATLSGLQYPVLSRREFGAVANFSTLLLDPASGLLFLG
ARDTIVALDTNKLNEPVRTVVWDVPQESRKTCMAKGKTEGECRNYIVLLELHSDGRHIYA
CGTHAFDPKCAYLEISSLTLRRDADGQVIVEMGRKKVPFDPRKRHTAVMIGDVLYAATSI
NFRGTEFDITRATGPEQKQVRSEQNVQWLDEPDFVSSAAVALSADNNETGEDDRIYFFFN
EAAQEYNFYSKVRVPRVARVCRSDVGGLRTLQQHWTTFLKAELVCEDKVRHRRFDVLVDV
FTLRHSPGEAGTTHFYGLFTTQWEPEWSAVCVFSVSDIVAAMNGPFRKGSDKSDALAPAG
LPRPGQCVNNALKAHGFDSSLKMPDNLLAYVRNHPLVQQSVNAAPLLVRKGAAYTKLAVT
LIGRREGQREEALLHLGTDSGELHQVAVLGENATLLREIPLFEATEPVNNILLYQGWVVV
GSPLSLARIQAQECALYLSCELCTRFRQLGCEWDVGKEGCVRSAAVPDHGVKTEEAVRKC
DYQEAERCSPPIKELRVSLGLRVVLPCAQLSPRPCSWEHPRNSLTKQRHPDLEVTVTKDG
LGSYICACQEGQMREHTPCRRAAYHLTLEDPGTAGALSGCTRHVVAFYVLVFFAGSLFGA
MLLHFASGRCEGMRRDSPVSAPLQPGSRLTDERNGIAAAEASRVRKRGNGGCLGDGLSAP
PAGDKGRNASASYANYSILSADVPDRPTAPGEGEGPEGGAGGVVGLGWDGWGPE
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgacttcggccggggtgatgttcgcttgtctcccggtgtgctgtttgctcctcggaacc
tcccgggcagcgactttgagcggactgcaatacccagttttaagtcgccgagagtttggg
gctgtggccaacttcagcacgttgctgctggatcccgcgtcgggtctcctcttcctgggc
gccagggacaccatcgtggcgctggacaccaacaagctgaacgagcccgtccgcacggtg
gtgtgggacgtgccgcaagagagcaggaagacttgtatggccaagggaaagactgagggt
gaatgccgtaactacatcgtgctgttagagttgcactccgatgggcgccacatctacgcg
tgtggcacgcatgcctttgacccaaagtgtgcctacctggagatctcctccctcaccctg
cggagggatgccgatggccaggtgattgtggagatggggaggaagaaggtcccctttgac
cccaggaagcgacacacagccgtcatgataggcgacgtgttgtacgccgccacctccatc
aacttccgcgggacggagtttgatatcacccgggcgacgggtccggagcagaagcaggtc
cgaagtgagcagaacgtgcaatggcttgacgaacccgactttgtgagctcggccgcggtg
gcgctgtcggccgacaataacgagacgggagaggacgacaggatctacttctttttcaac
gaggcggcccaggagtacaacttctattccaaagtccgggtgcccagggtggcacgcgtg
tgcaggtctgacgtgggaggtctccggacgctgcagcagcattggaccacctttctcaag
gcggagctggtgtgcgaggacaaagtccgacatcggcgctttgacgtcctggtggacgtt
ttcaccttgcggcattctcctggagaagccggaacgacgcacttctatggactcttcacc
acacagtgggaacccgagtggtcagcggtgtgtgttttcagcgtgtcggacatcgtcgcg
gcgatgaacggcccgtttagaaaaggcagcgacaaaagcgacgcgctcgcaccggcgggc
ttgccgaggcctggccagtgtgtgaacaatgcgctgaaggcacacggctttgactcctcc
ctcaaaatgcccgacaacctgttggcatacgtgaggaatcaccccctcgtgcagcagagt
gtcaacgcggcgcccctgctggtcagaaagggggcggcgtacaccaaactggccgtcacg
ctgatcggccgcagagagggccagagagaagaggccttgctccacctgggaacagactct
ggggagctccatcaggtggcagtcttgggcgagaatgccactttactccgtgaaattccc
ttatttgaggccacggagccggtcaacaatattttgctgtaccaaggttgggttgtggtg
ggcagcccgctgtctctggcgcgcatccaggcgcaagaatgcgcgctctatttaagctgc
gaattgtgcacccgattccgtcaactgggctgcgagtgggacgtcggcaaggaaggctgc
gttcgctccgcagcggtgcccgatcatggagttaaaacggaagaagccgtgagaaaatgt
gactaccaggaagcagagcgctgttcgccgcccatcaaggagttgcgtgtttcgctgggt
ctgcgtgtggtgttgccttgcgcccagctgtctcccaggccctgcagctgggagcaccct
cgcaacagtctcaccaagcagcggcaccctgacttggaggtgaccgtcaccaaagacgga
ctgggaagttacatctgtgcctgccaggaaggacaaatgcgtgagcacaccccttgccgt
cgagcggcctatcatctgacgctggaggaccccggcaccgcgggagccctgtcgggatgc
actcgtcacgtggtggccttctatgtcctcgttttcttcgccggctcgctgttcggggcg
atgctcctccactttgccagtggtcggtgtgagggcatgaggcgggactcgccggtctcc
gcccccctgcagccgggctcccgtttgacagatgaacgcaacgggatcgcagccgccgaa
gccagccgagtccggaagcggggaaacggcggctgccttggcgacggtttgagcgccccg
ccggctggcgacaaaggcagaaatgcgagcgcctcgtacgctaactacagcattttatct
gcggacgttccggaccgaccgaccgcccccggggagggagagggtcccgaggggggggcg
ggcggagtcgtcggattaggctgggatggatgggggcctgagtga
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