Syngnathus scovelli (Gulf pipefish): 125983099
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Entry
125983099 CDS
T08785
Name
(RefSeq) bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1
KO
K02576
heparan sulfate N-deacetylase/N-sulfotransferase NDST1 [EC:3.5.1.-
2.8.2.8
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
sscv01100
Metabolic pathways
Module
sscv_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
125983099
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sscv01003
]
125983099
Enzymes [BR:
sscv01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.2 Sulfotransferases
2.8.2.8 [heparan sulfate]-glucosamine N-sulfotransferase
125983099
Glycosyltransferases [BR:
sscv01003
]
Unclassified
Sulfotransferases
125983099
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSNSD-CE
HSNSD_N
Sulfotransfer_1
Sulfotransfer_3
Motif
Other DBs
NCBI-GeneID:
125983099
NCBI-ProteinID:
XP_049599944
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All DBs
Position
1:complement(10883783..10932509)
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AA seq
909 aa
AA seq
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MRSQLTVINPPAGGAVRRETMLGCVTRLRRLVRLLPLQMSLLLLFLFCTISVFISAYFLY
GVKRELEPSVVGVSGSEGASADSDDLRVTPSRLLPLRSVSGGPGVDPAGARTDPVVLVFV
ESQYSQLGQDIVAILEDGRFQYRTEISPGKGDMPTLTDKERGRFTLVIYENILKYVNLDA
WNRELLDKYCVEYGVGIIGFFKANENSLLSAQLKGFPLFLHSNLGLKDCSVNPKSPLLFI
TRSGQPLPGPLPGDDWTVFQSNHSTYEPVLLAKTQSAESIPSMGQNAALLPSVVQDLGLH
DGIQRVLFGNNLAFWLHKLVFVDAVAFLTGKRLSLSLERYILVDVDDIFVGKEGTRMKVP
DVKALLETQREMRTHVPNFTFNLGFSGKFFHAGSEEEDLGDDLLLSYVKEFWWFPHMWSH
MQPHLFHNQSVLAEQMLLNKKFALEHGIPINMGYAVSPHHSGVYPVHLQLYDAWKKVWGI
KVTSTEEYPHLKPARFRRGFIHSGISVLPRQTCGLFTHTIFYKDYPGSPNELDKIINGGE
LFLTVLLNPISIFMTHLSNYGNDRLGLYTFKSLMMFVKTWTNLKMQTLPPMQLAQKYFNL
FPSERDPLWQDPCEDKRHKDIWSKEKTCDRFPKLLVIGPQKTGTTALYLFLSMHPDLTSN
YPSKETFEEIQFFNGHNYHRGIDWYMEYFPLPSNASSDYYFEKSANYFDSDVTAQRAAAL
LPKAKIIAILINPADRAYSWYQHQRAHDDPVALKYSFHNVITAGPDSPANLRILQNRCLV
PGRYANHLERWLNYYHSSQLLVLDGEMLKTEPASVMDKIQKFLGLTNVINYHKILTFDPK
KGYWCQLLEGGKTKCLGKSKGRRYPDMDPESLTFLTDYYRDRNIELSKLLYRMGQPLPSW
LREEMVHTR
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcacagctcaccgttatcaaccctcctgcggggggagcggtgcggcgagagacg
atgctgggatgcgtgacccgcctccgtcggctggtccgtctcctccctctacagatgtcc
ctcctcctcctctttctcttctgcactatcagcgtcttcatctcggcctacttcctttat
ggcgtcaagcgggagctagagccatcagtagtgggcgtgtctggttcagagggagcttcg
gccgactcggacgacctgagggtcacaccatctcgacttttaccgctgcgtagcgtctct
ggaggccctggggtggatcctgccggggccaggacagatcctgtagtgctggtctttgtg
gaaagtcagtattcgcaactgggtcaggatattgtggccattttagaggatggccgcttc
cagtaccggactgagatatcgcccgggaaaggggacatgccaacattgacggacaaggag
agaggacgtttcacactggtgatttacgaaaacattctcaagtatgttaacctggacgcg
tggaaccgagagctgctggataagtactgtgtggaatatggagtgggcatcattggcttc
ttcaaggccaacgagaacagtctgctgagtgcgcagctgaaaggattcccgctctttctc
cattccaacttgggtctaaaggactgctcggttaaccccaagtcacccctactctttatc
acccgatccggacagccgctgcccgggcctctccctggagatgactggaccgtcttccaa
tccaaccactcaacgtacgagccagtgttgctcgccaaaactcaatcggcagagagcatt
ccgtccatggggcagaatgctgctctgctcccgtcggtggtgcaggacttgggccttcac
gatggcatccagagggtcctgtttgggaataacttggccttctggctccacaagctggtg
tttgtggatgccgtggcctttcttaccgggaagaggctctcgttgtccctggagcgctac
attctggtagatgtggatgacatctttgtgggaaaagagggcacccgcatgaaggtgcct
gacgtaaaggcgctgctggagacgcagagggagatgcgcacccatgttcccaacttcacc
ttcaatctgggcttctcaggaaaattctttcacgctggatcagaggaggaagacctgggc
gatgacctgctgctttcctatgtgaaggagttctggtggttccctcacatgtggagccac
atgcagccccatctcttccacaaccagtctgtgctggctgagcagatgctgctgaacaaa
aagtttgccctggagcatggaatccctatcaacatgggatatgctgtgtcaccgcaccat
tcaggcgtctacccagtccacttgcaattgtacgacgcctggaagaaggtttggggcatc
aaagtgacaagcaccgaggagtacccgcatctcaagccggcccgctttcggcgaggtttt
attcacagcggcattagcgtgctgcccaggcagacgtgcggtcttttcacacacaccatc
ttctataaagactacccaggcagccccaatgagctggacaaaatcatcaacggaggagaa
ctcttcctcacggttctgctgaacccaatcagcatcttcatgacccatttgtccaactac
ggaaatgaccgtcttggcctgtacacctttaaaagcctaatgatgtttgtcaagacctgg
acaaatctaaaaatgcagaccctcccgccaatgcagctggcccaaaaatacttcaacctg
tttccatctgagagagatccactctggcaggatccatgtgaagacaaaaggcataaagac
atctggtccaaggaaaaaacttgtgaccgcttccccaagctacttgtcattgggcctcag
aagacaggcacaacagcgctctacctgttccttagcatgcaccccgacctgaccagtaac
taccccagcaaggagacttttgaagagatccagttcttcaatggtcacaactatcacaga
ggcattgattggtatatggagtacttccccctgccttccaatgctagctctgactactac
tttgagaagagtgccaactactttgattctgacgtgactgctcagagggccgcagcactc
ctgcccaaagccaaaatcatcgccatcctcatcaacccagccgacagagcgtactcttgg
taccagcaccaaagagcccacgatgatccggttgcattgaaatactcatttcataatgtc
atcactgccggccccgacagtccggccaatctccggatcctccagaatcgatgtttggta
ccaggccggtacgctaatcacctggagcgctggctcaactactaccattccagccagctg
ttggtcttggatggggagatgctgaaaactgagcccgcctccgttatggataaaatccaa
aagttcctaggtttaactaacgtcatcaactaccacaagattctaacatttgatcccaaa
aaagggtactggtgccagctgctagagggtgggaagacaaagtgtctggggaagagtaaa
ggacgccggtatcctgacatggatcccgagtcgttgacgttcctcacggattactacagg
gatcgtaacattgagctgtcaaagctgctgtacagaatgggtcaaccgctccccagctgg
ctcagagaggagatggtccacaccaggtag
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