Syngnathus scovelli (Gulf pipefish): 125984683
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Entry
125984683 CDS
T08785
Symbol
ss18
Name
(RefSeq) protein SSXT isoform X1
KO
K15623
protein SSXT
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125984683 (ss18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sscv03036
]
125984683 (ss18)
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
125984683 (ss18)
GBAF(ncBAF) complex
125984683 (ss18)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
125984683
NCBI-ProteinID:
XP_049602703
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All DBs
Position
17:complement(5189624..5196572)
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AA seq
382 aa
AA seq
DB search
MSVAFVPHRQRGKGDITPAGIQKLLDENNHLIQSIMDFQSKGKTTECSQYQQILHRNLVY
LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGGPPQPSHGHNMPSEGMVGCGPPAPHM
QNQMNGQMPGPNHMPMQGPGPGPNQPPNMPAGSMNMPPSSHGSMGGYNHAVPPSQGMPAQ
SQMNMTQGQPMGNYGPRPSMNMQPNQGPMMHQQPPSQQYNMPPGGGGQHYQGQQNPMGMM
GQVNQGNHVMGQRPMPPYRPPQQGPPQQYPGQEDYYGDQYSHAGQGASEGNAQYGQQQEA
YQQGPPQQQGYPPQQQYPGQQAYPPQQQGYGPSQNAPGQYPNYPQGQGQQYGGYRPPQPG
PPQAQQQRPYGYDQGQYGNYQQ
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggcgttcgtacctcacagacagcgtggcaagggtgatattacccctgctgga
atacaaaagctacttgacgaaaataaccatttgattcagagtattatggacttccagagc
aagggcaaaacaacagagtgttcacagtatcaacaaatactgcacagaaatttagtgtac
ctggccacaatagcagactctaatcagaacatgcagtctcttctaccagcaccacccact
caaaacatgcctatgggccccggtgggatgaaccaaagcggagggccgcctcagcccagt
cacggtcacaacatgccctccgaggggatggtgggctgcgggccacctgccccacacatg
cagaaccagatgaacggacaaatgcctgggcccaatcacatgcccatgcagggccccggt
ccaggccccaaccagccccccaacatgcccgccggctctatgaacatgcccccgagcagc
cacggatccatgggcggttacaaccacgccgtccccccgtcgcagggcatgccggcacaa
agccagatgaacatgacgcagggccagcccatgggcaactacgggccacgacccagtatg
aacatgcagcccaatcaaggacccatgatgcaccagcagcctccatcccagcagtacaac
atgcctcccggcgggggcggccagcactaccaaggccagcagaaccccatgggcatgatg
ggccaggtgaaccagggcaatcacgtgatggggcagaggcccatgcccccgtatagaccg
cctcagcaaggaccccctcagcagtacccagggcaggaagactactatggggaccagtac
agtcacgcaggacagggagcctctgaagggaatgcccagtacggccaacagcaagaggcc
tatcagcaaggccccccacagcagcagggttacccacctcaacagcagtacccgggtcag
caggcttacccgccacagcagcagggctacgggccttcccagaatgctccgggacagtac
cccaactacccccaggggcaggggcagcagtacggcggctatcgcccccctcagcccgga
cccccgcaggcccagcagcagcgcccttatggctacgaccagggccagtatggaaattac
cagcaatga
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