Syngnathus scovelli (Gulf pipefish): 125989444
Help
Entry
125989444 CDS
T08785
Name
(RefSeq) troponin C, skeletal muscle
KO
K12042
troponin C, skeletal muscle
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04020
Calcium signaling pathway
sscv04814
Motor proteins
sscv04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
125989444
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
125989444
04820 Cytoskeleton in muscle cells
125989444
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sscv04812
]
125989444
Cytoskeleton proteins [BR:
sscv04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Troponins
125989444
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_5
EF-hand_9
EF-hand_FSTL1
AIF-1
EH
SPARC_Ca_bdg
EF-hand_11
p25-alpha
EF_EFCAB10_C
SPEF2_C
CDI_toxin_EC869_like
Motif
Other DBs
NCBI-GeneID:
125989444
NCBI-ProteinID:
XP_049611789
LinkDB
All DBs
Position
2:complement(15283622..15287598)
Genome browser
AA seq
161 aa
AA seq
DB search
MPTDAQSDARSFLTEEMIAEFKAAFDMFDTDGGGDISTKELGTVMRMLGQNPSREELDAI
IEEVDEDGSGTIDFEEFLVMMVQQLKEDQAGKSEEELSECFRIFDKNGDGFIDREEFGDI
LRMTGEPVTEEDIDEMFGESDNNKDGKIDFDEFLKMMENVQ
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
atgcctactgacgctcaaagcgatgcccgctccttcctcactgaggagatgattgcagag
ttcaaggccgcctttgacatgtttgacactgatggcggtggtgacatcagcaccaaggag
ttgggcaccgtgatgaggatgttgggacaaaacccatcgagggaggagctggacgccatc
attgaggaagtagatgaggatggcagcggtaccattgactttgaggagttcttggtcatg
atggtgcaacagctcaaggaggaccaggcagggaagagtgaagaggagctctctgaatgc
ttccgtattttcgacaagaacggagacggattcatcgaccgagaggagtttggagacatt
ctgcgcatgaccggagagcctgtcacagaagaagacattgatgaaatgtttggcgaatct
gacaataacaaggacggaaagattgattttgacgagtttttgaagatgatggagaatgtc
cagtaa
DBGET
integrated database retrieval system
