Shewanella sediminis: Ssed_0329
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Entry
Ssed_0329 CDS
T00596
Name
(GenBank) ATP-dependent DNA helicase RecG
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
sse
Shewanella sediminis
Pathway
sse03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Ssed_0329
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sse03400
]
Ssed_0329
Enzymes [BR:
sse01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Ssed_0329
DNA repair and recombination proteins [BR:
sse03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Ssed_0329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecG_wedge
ResIII
RecG_dom3_C
tRNA_anti-codon
SecA_DEAD
AAA_30
SNF2-rel_dom
nSTAND3
Cdd1
Zot
Helicase_RecD
SLFN-g3_helicase
ERCC3_RAD25_C
IMS_HHH
Antimicrobial_2
Motif
Other DBs
NCBI-ProteinID:
ABV34942
UniProt:
A8FQ19
LinkDB
All DBs
Position
complement(380531..382606)
Genome browser
AA seq
691 aa
AA seq
DB search
MNRLDLVPVTELKGVAKKMAERLAKLGIHTVQDLLFHLPLRYEDRTQIYPIASLYPGNYG
TIEAVIQSSQIIQGRKRMLTCTVRDDTGSLTLRFFNFSVAQKNGLENGLTIRAYGEIRRG
KHQAEIIHPEYKLVQTNSDLPLSDTLTPVYPTTEGLKQASWIKLTEQALALLEEGGLQEL
IPPELQPNNLSLKAALMLLHRPHNGVNLFELEQGTHPAQQRLIQEELLAHNLSMLKLRQR
SNRDKAVLMPASGQLLNPFLKSLPFKPTGAQQRVGADISTDLEKPFPMMRLVQGDVGSGK
TIVAALAALQAIENGYQVAMMAPTELLAEQHAENFTQWFEPLGLKVGWLAGKLKGKARTQ
SLMDIESGEANMVIGTHAIFQEKVTFNKLALIIIDEQHRFGVHQRLGLREKGIAQGFHPH
QLIMTATPIPRTLAMTAYADLDTSVIDELPPGRTPVATVAVSDSRRNEVIERVRQAATND
GRQAYWVCTLIEESEVLECQAAEDTAEELRLMLTELKVGLVHGRMKSAEKQAIMAEFKAG
NLNLLVATTVIEVGVDVPNASLMIIENPERLGLAQLHQLRGRVGRGAVASHCVLMYKAPL
SPSATKRLGVLRDSNDGFIIAQKDLEIRGPGEVLGTKQTGIADMKIADLIRDQALIPHIQ
KLAVHLMQQAPDNVDGIVQRWLGDREQFVQA
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
gtgaatagactcgaccttgttcccgtaactgagcttaaaggcgttgccaagaagatggcc
gaacgcttggctaagctcggcattcatacggtacaggatctgctgtttcacctgcccctg
cgttacgaagatcgcacccagatctatcccatcgcctcactttatcctggtaactacggt
acaatcgaagccgtcattcaatccagccagattattcagggccgcaagcgcatgctgacc
tgtaccgtgagagatgacaccggcagcctcaccctcagattcttcaacttctctgtcgca
caaaaaaatggattagagaatggattaaccattcgcgcctatggcgaaattcgccgtgga
aaacatcaggcagagatcattcatccggaatataagctggtacagaccaatagcgacctt
cccttgagcgataccctcacgccagtctatccgacaaccgaaggcctcaaacaagccagc
tggataaagctgacggagcaagccttagccctgctcgaagagggaggtctgcaggagttg
ataccgccggagcttcagcccaataacttgagcttaaaagctgctttaatgctgttgcat
cgacctcataacggcgtcaacctatttgaactcgaacaaggcactcacccggcgcaacag
aggttaattcaagaggagttgctggcccataacctaagtatgttgaagctgcgtcaacgc
agtaatcgggacaaggccgtcttaatgcctgcatcggggcaactgcttaatccatttttg
aaatcgcttccctttaagccaaccggagcccaacaaagagtcggagcagatatctcgacg
gatctggagaagccatttcctatgatgcgtctcgttcagggcgatgttggctcaggaaaa
accatagtcgccgccttggccgccctgcaggcgattgaaaatggttaccaggtcgccatg
atggctccgaccgagctccttgcggagcaacatgccgagaactttactcaatggtttgag
cccctgggactcaaagttggctggttggcaggaaaattaaaaggaaaggcgagaacacaa
tctctgatggatattgagagtggtgaagccaatatggtgataggtactcacgccatcttt
caagagaaggtcacctttaataaactggccttgatcatcatagatgaacaacacagattt
ggcgttcatcaacgtttaggactcagggagaaagggatagcccaagggttccatccccat
cagttgatcatgaccgcaacccccattccacgaacattggcaatgacggcatatgcagac
ttagatacttcggtgattgatgagctgccacccgggcgaacgccggttgctaccgtggcc
gtgtcggactcgaggcgcaacgaagtgatcgaaagagtcagacaagccgccactaacgat
ggcagacaggcttattgggtctgcaccttaattgaagagtcagaggtactcgagtgccaa
gccgctgaagataccgccgaagagcttaggctcatgctcacagagctcaaggtaggcttg
gttcacggccgcatgaagtccgccgagaagcaagccattatggccgagttcaaggccggc
aacctgaatctgttagtcgccaccaccgtcatcgaagtgggagtcgatgtacccaatgcc
agcttgatgatcatcgaaaaccctgagcgattaggtttagcccaactgcaccagcttagg
ggccgcgtcggccggggcgcggtggccagccactgcgtacttatgtataaagccccactc
tcgcccagcgccaccaagcgattaggtgtgctcagagacagtaacgatggctttatcatt
gcccaaaaagatcttgagatcagaggtcccggtgaggtgctaggcactaagcaaacagga
attgccgatatgaaaatcgccgatctcatccgagatcaggcccttattcctcatattcaa
aaactggccgttcacctcatgcagcaagcgccggacaatgtcgatggtattgtgcagcgc
tggctaggcgatcgagagcagtttgtgcaggcataa
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