Shewanella sediminis: Ssed_3302
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Entry
Ssed_3302 CDS
T00596
Name
(GenBank) putative PAS/PAC sensor protein
KO
K07636
two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:
2.7.13.3
]
Organism
sse
Shewanella sediminis
Pathway
sse02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Ssed_3302
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sse01001
]
Ssed_3302
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sse02022
]
Ssed_3302
Enzymes [BR:
sse01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
Ssed_3302
Protein kinases [BR:
sse01001
]
Histidine kinases
OmpR family
Ssed_3302
Two-component system [BR:
sse02022
]
OmpR family
PhoR-PhoB (phosphate starvation response)
Ssed_3302
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PhoR
HATPase_c
HisKA
PAS
PAS_8
HATPase_c_2
Activator_LAG-3
Paramyx_P_V_C
PAS_4
PAS_9
Motif
Other DBs
NCBI-ProteinID:
ABV37906
UniProt:
A8FYI3
LinkDB
All DBs
Position
complement(4015060..4016379)
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AA seq
439 aa
AA seq
DB search
MFDSYSGYRLLSRLITYLLLCFILGLIVGQVVWVLLIGAIALLFWHYRQLSRLNFWLWRD
RRLTPPNGSGSWEGVFNGIYRLQGKNRKRVSQLAFLLGQFRQGAEALPDAAVVLDSEHNI
IWCNKLAQLLLGFVWPLDRGQRIDNLLRHPDFANYLKKAEYQEPLELASPHAEGRVLEIR
VMGYGSGQFLLIARDITRVRQLEGMRKDFVANVSHELKTPLTVLQGYLEMMQGMAEPGSP
NIKAVEQMQQQTNRMRSMVEQLLVLSRIEDSAEINLALTVNMSHMMEILKEEANALSQGE
YELSFYCEPDLHLYGNELELRSACSNLISNAIRYTEPGGKIDISWKKVATGGIFSVSDSG
DGIAPQHIGRLTERFYRVDSARTRQRGGTGLGLAITKHALSHHQSELMVTSELGKGSTFS
FLIPSNLMESKTEILDEQQ
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgtttgattcatattcaggttaccgactgctttcccggttaataacctacctgttgtta
tgttttattctgggtctcattgtaggccaggtggtttgggttctccttatcggcgctatc
gcgctacttttttggcattatcgtcaactctcccgactcaacttttggctatggcgtgac
aggcgtttaactcctcccaacggcagtggcagctgggagggtgtattcaatggtatctac
cgccttcagggtaagaacaggaaaagagtgtctcaactagcctttctgcttggtcagttc
aggcagggggcggaggcactgcctgatgcggcggtggtgctcgactctgaacacaatatt
atctggtgtaataaactcgctcagctgctgcttggttttgtctggccgttagaccgtggt
caacgtatcgataaccttttgcgtcacccggattttgctaactacttgaagaaagcggaa
tatcaagagccactggaactcgcatctccccatgccgaaggtcgtgtccttgagattagg
gtgatgggatatggttcggggcagtttttgttgatcgccagagatatcaccagagtaaga
cagctcgaggggatgcgaaaagactttgtcgctaatgtttcccatgaactcaagacccca
ctcacggtgttgcaaggttaccttgagatgatgcagggaatggctgagcccggctctcct
aacattaaagccgtggagcagatgcagcagcagacgaatagaatgcgctctatggtagag
cagttactggtgctatccagaatcgaagattcggcggaaataaacctggcgctcacggtt
aatatgtcccacatgatggagatattaaaggaggaggcaaatgcattgtcccaaggtgaa
tatgagttgagtttctattgtgaacccgacctgcacctctatggcaatgaactcgagtta
cgtagcgcctgctctaatcttatctccaatgccatcaggtacacagagcctggaggtaaa
atcgatatcagctggaaaaaggtggccacagggggcattttcagtgttagtgatagtgga
gatggtattgcaccacagcatattggtcgtctgaccgaacgtttttatcgtgtcgacagt
gcgcgcacgcggcaaagaggtgggacagggttgggcctcgcgatcaccaagcatgccctc
agtcaccaccagagcgaacttatggttactagtgagctgggcaaggggagtacattcagt
ttccttatcccgtctaatcttatggagagcaagactgaaatcctggatgaacagcagtga
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