Shewanella sediminis: Ssed_3306
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Entry
Ssed_3306 CDS
T00596
Name
(GenBank) putative exonuclease, RdgC
KO
K03554
recombination associated protein RdgC
Organism
sse
Shewanella sediminis
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sse03400
]
Ssed_3306
DNA repair and recombination proteins [BR:
sse03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Ssed_3306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RdgC
RE_HindIII
Motif
Other DBs
NCBI-ProteinID:
ABV37910
UniProt:
A8FYI7
LinkDB
All DBs
Position
4018647..4019558
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AA seq
303 aa
AA seq
DB search
MWFKNLTVYRFNKPFSVDTEALEKSLEDFTFSPCSSQDISKFGFSNALGKQGQTLVHSAS
ERHLICATKEEKILPSQVIKEALEDKVAQIEAEEDRKLAKKEKDAMKEEIVMTLLPRAFT
RRSQIRALIIPEIEMILVDSSSAAKSEELLALLRKALGSLPIIPLSFKTPIETQLTEWLK
GNSTPAPFIMQDEAELKTDSDEGGIVRFKQQDLTEDEVLAHIEVGKQVHKLALYFGQSIA
FLLQSDAGIKRLKFSEEFRAGNDEVGTEDPMARLDADFALMGSELIALMNSLVEVLGGVE
DSI
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgtggtttaaaaatctgactgtttaccgttttaataaacctttctctgttgatacagaa
gctcttgaaaagtcattggaagacttcacattctctccatgctcaagccaagacatcagc
aagttcggtttttccaatgcacttggaaaacaaggccaaacactggtacacagtgccagt
gaaagacaccttatctgtgcaacaaaggaagagaagatccttccttcacaggtgataaaa
gaagcactcgaagataaagttgctcaaattgaagccgaggaagatcgcaaactggcaaag
aaagagaaagatgcaatgaaagaggagatcgtcatgactctgcttcctcgtgcattcact
cgccgcagtcagatccgcgcactgatcattccggaaattgagatgattctcgtcgatagc
tcaagtgctgctaagtcagaagagttactggctctgctacgtaaagccctgggctcactt
cctatcattccgttaagttttaagaccccaatcgagactcagttaaccgaatggttaaaa
ggaaactcgactccggctccttttatcatgcaggatgaagccgaacttaaaactgactcc
gatgagggcggcatcgttcgctttaagcaacaagacctcaccgaagatgaagtgctcgct
cacattgaagtgggtaagcaggttcacaagctggctctgtatttcggccagtctatcgcc
ttcctgctgcagtctgatgccgggattaaacgtttaaagttctctgaagagttcagagcg
ggcaacgatgaggtcggcactgaagatcctatggcgcgcttagatgcagactttgcctta
atgggcagtgagcttatcgccttgatgaactcattagtcgaagtgctcggcggtgtagaa
gacagcatttaa
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