Shewanella sediminis: Ssed_3403
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Entry
Ssed_3403 CDS
T00596
Name
(GenBank) carbamoyl-phosphate synthase, large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
sse
Shewanella sediminis
Pathway
sse00220
Arginine biosynthesis
sse00240
Pyrimidine metabolism
sse00250
Alanine, aspartate and glutamate metabolism
sse01100
Metabolic pathways
sse01110
Biosynthesis of secondary metabolites
sse01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
Ssed_3403
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
Ssed_3403
00220 Arginine biosynthesis
Ssed_3403
Enzymes [BR:
sse01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
Ssed_3403
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
ATP-grasp_3
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_4
CoA_binding_2
ATP-grasp_2
BamE
Motif
Other DBs
NCBI-ProteinID:
ABV38007
UniProt:
A8FYT4
LinkDB
All DBs
Position
complement(4146731..4149949)
Genome browser
AA seq
1072 aa
AA seq
DB search
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM
ADATYIEPIHWEVVRNIIAKERPDAILPTMGGQTALNCALELESKGVLEEFNVEMIGATA
DAIDKAEDRSRFDKAMKAIGLECPRAGIAHTLDEANAVVAELGFPCIIRPSFTMGGSGGG
IAYNKEEFEEICSQGLELSPTSELLIDESLIGWKEYEMEVVRDRNDNCIIVCAIENFDPM
GVHTGDSITVAPAQTLTDKEYQLMRNASLAVLREIGVETGGSNVQFGINPVDGRMVIIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGFTLDELKNDITGGNTPASFEPAIDYVVTKLP
RFNFEKFAGANDRLTTQMKSVGEVMAIGRTFQESLQKALRGLEVSKNGLDPIIDIDEPEA
MARIRHELQEPGAERIWYIADAFRAGLTVDDIFGLTKIDPWFLVQMQDLLQLESEVKESG
MSGMNETFLRQLKRKGFSDIRLSLLLGVSESEMRKLRHRHEIFPVYKRVDTCAAEFSTDT
AYMYSTYEEECEAAPSNRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNC
NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARELEAAGVPI
IGTSPDAIDRAEDRERFQQAIQRLEMKQPENDTVTTVERAVISAERIGYPLVVRPSYVLG
GRAMEIVYDEQDLRRYFNEAVSVSNASPVLLDRFLDNAIEIDIDAVCDGETVVVGSIMEH
IEQAGVHSGDSGCSLPPYSLSDDIQNRMREQVGKLAMELGVIGLMNVQFAVKDDEIYMIE
VNPRAARTVPFVSKATGVPLAKIAARVMAGQSLKSQNFTKEVIPPYYSVKEVVLPFNKFP
GVDPLLGPEMRSTGEVMGVGETFAEAYAKAQLGATSEVPKSGRALLSVRNSDKARVVDLA
AKLIGLGYEIDATHGTAVVLGEAGINPRLVNKVHEGRPHILDRIKNDEYTYIVNTTEGRQ
AIEDSRQLRRGALRYKVNYTTTLNAAFATCMAHSADDRSNVNSVQELHSKIK
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtacagatataaaaagtattcttatcctgggtgctggcccgattgttatc
ggacaagcatgtgagtttgattactctggtgcccaggcttgtaaagcgctgcgtgaagaa
ggttaccgggtcatcctcgttaactctaatcctgcaactattatgaccgatccagagatg
gccgatgcgacttatatcgagccaattcactgggaagttgttcgtaacattattgccaaa
gaacgccccgatgcgattcttccgactatgggcggtcagacggcacttaactgtgctctt
gagctagagagcaaaggcgtcctcgaagagtttaatgttgagatgatcggtgcgactgcc
gatgcgattgataaagctgaagatcgtagtcgtttcgataaggcaatgaaagcaattggc
ctcgagtgtcctcgtgccggtattgcccatacattggatgaggccaacgccgtagtggca
gagcttggcttcccttgtattatccgcccgtcattcaccatgggtggcagtggtggtggt
atcgcctacaacaaagaggagttcgaggagatctgttctcagggtcttgaactttcaccg
acgagcgaactgcttatcgatgaatctttgattggttggaaagagtatgagatggaagtg
gtacgtgatcgcaatgacaattgcatcatcgtctgtgctatcgaaaactttgatcctatg
ggcgttcataccggtgactctattacggtcgcccccgcacaaaccctaactgataaagag
tatcagttgatgcgtaatgcatcacttgctgtactgcgtgagattggtgttgagaccggt
gggtcaaacgtacagtttggtattaaccctgttgatggccgtatggttatcatcgagatg
aacccgcgtgtatcacgttcatctgcactcgcgtctaaagcgacgggtttcccaatcgct
aaaattgcggcaaaactggctgttggtttcaccttagatgagcttaaaaatgacatcaca
ggtggcaacacaccagcatcatttgagcctgcaatcgattacgtagtgactaaattacca
cgctttaactttgagaagtttgccggtgcgaatgaccgcctcacgactcagatgaagtca
gtgggtgaagtgatggccattggccgtactttccaggaatcacttcaaaaagcccttcgt
ggtcttgaagttagcaaaaatggtttagacccgataatcgatatcgatgaaccagaagct
atggcgcgtattcgtcatgaacttcaagagccgggtgccgagcgtatctggtatatcgca
gacgcatttcgcgccggattaaccgtcgatgatatctttggtttaacgaagattgaccct
tggttcttagtacagatgcaagatctgcttcaacttgaatctgaagtgaaagaatcgggc
atgtctggcatgaacgagacattccttcgccagttaaagcgtaaaggtttctctgatatt
cgtctttcacttttattgggtgttagtgaatctgagatgcgaaaattgcgtcacagacat
gagatattcccagtctacaagcgcgtcgatacctgtgctgccgaattttcaactgatacg
gcttacatgtactctacctatgaagaggagtgtgaggcagcaccgtcaaatcgtgacaag
atcatgatattaggtggtgggccaaacagaattggtcaaggtatcgagtttgattactgt
tgtgttcatgcggcgttagcgctgcgtgaagatggttacgaaaccatcatggttaactgt
aaccctgagactgtatcgaccgattacgacacttcagacagactctattttgagcctgtt
acccttgaagatgtgctggagatcgtccgtattgaaaagccgaaaggtgttatcgttcaa
tacggtggtcagacgccgcttaagctggctcgtgaactcgaagccgcgggtgtgcctatt
atcggtaccagcccggatgcgattgaccgcgccgaagatcgtgagcgtttccaacaggcg
attcagcgtctagagatgaagcagcctgaaaatgacacggttaccactgttgaaagagct
gtgatttctgccgagcgtatcggttacccattagtggttcgcccatcttatgtactgggt
ggccgcgcgatggaaattgtttatgatgagcaggacttgcgtcgttacttcaacgaagcg
gttagcgtgtcaaatgcatcgcctgtactactggaccgcttcctggataatgcgattgag
atcgatatcgatgctgtctgcgacggtgaaaccgttgttgtcggttctatcatggaacat
atcgagcaagcgggtgttcactcgggtgactcaggatgttcactaccgccctatagctta
agcgacgatattcaaaatcgtatgcgcgagcaggttggtaagctagcgatggaactgggc
gttatcggtttgatgaatgtccagtttgcggtgaaggatgatgagatctacatgatcgaa
gttaatccacgcgcagcgcgtaccgtgccatttgtctctaaagctacgggcgtgccttta
gctaagattgcggcgcgagtgatggcaggtcaaagcctaaagtcacagaacttcaccaag
gaagttatcccaccctattactctgttaaagaggtggtattacctttcaataagttcccg
ggtgtggatcctctgcttggccctgaaatgcgctcaactggtgaagtgatgggggtcggt
gaaacgtttgccgaagcctatgcaaaggctcaactcggtgccaccagcgaagtccctaag
tctggccgcgcgttattgtctgttcgtaacagtgataaggcacgtgttgttgatttagcg
gctaagttaattggcttaggttatgagatcgatgcgactcatggtaccgcggttgtacta
ggtgaagcgggtatcaatcctcgtttggtaaacaaggtacatgaaggtcgtccacacatt
cttgaccgtataaagaatgatgagtacacctacatagttaacacaaccgaggggcgtcag
gcgattgaagactcacgccagttgcgtcgtggtgccttgagatacaaggttaactacacg
acaaccttgaatgctgcatttgcgacctgtatggctcactcggcagatgatcgtagtaat
gtaaactctgtgcaagaattgcatagtaaaattaagtga
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