Shewanella sediminis: Ssed_3497
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Entry
Ssed_3497 CDS
T00596
Name
(GenBank) ATPase AAA-2 domain protein
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
sse
Shewanella sediminis
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
sse03110
]
Ssed_3497
Chaperones and folding catalysts [BR:
sse03110
]
Heat shock proteins
HSP100
Ssed_3497
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_16
AAA_22
Sigma54_activat
AAA_14
AAA_24
TniB
nSTAND3
IstB_IS21
bpMoxR
AAA_18
ATPase_2
AAA_7
DUF815
ABC_tran
NBD_SMAX1
NACHT
AAA_19
AAA_25
ATP_bind_1
DNA_pol3_delta2
Motif
Other DBs
NCBI-ProteinID:
ABV38101
UniProt:
A8FZ28
LinkDB
All DBs
Position
complement(4261038..4263611)
Genome browser
AA seq
857 aa
AA seq
DB search
MRLDRMTNKFQTAISDAQSLALGRDHQFIEPIHLMMALLNQDNGSIHPLLTQAGIRVSSL
RALLNQEFERLSQVEGTGGDIQLSQALIRLLNLCDKLAQKRKDKYISSELFILASLEGND
TLAQNLKKSGATKELLEETIKQIRAGKNVDDPNAEDQRQALKKYTVDLTERAEQGKLDPV
IGRDDEIRRTIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGIKNKRVLSL
DMGSLVAGAKYRGEFEERLKAVLNELYQEEGQVILFIDELHTMVGAGKGDGAMDAGNMLK
PALARGDLHCVGATTLDEYRQYIEKDAALERRFQKVLVEEPNVEDTIAILRGLKERYELH
HHVEITDPAIVAAASMSNRYVSDRKLPDKAIDLIDEAASSIRIQIDSKPEPLDKLERRSI
QLKLEEQALSKETDEASLRRLYSIRKELRSVDAKASELNEIWHTEKASLAGTQHIKADLE
QARLDLDVARRASDLTRMSELQYGRIPELEKQLDLASQAEMQDMTLLRNKVTDVEIAEVL
SKATGIPVSKMLEGEKEKLLHMEEALHSRVIGQNEAVDAVSNAIRRSRAGLSDPDRPIGS
FLFLGPTGVGKTELCKALAKFLFDTESALVRIDMSEFMEKHSVARLLGAPPGYVGYEEGG
YLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL
GSDVIQDRFTELSYGEMKSEVMNVVVHSFRPEFLNRIDETVVFHPLDEKHIKHIAGIQIE
SLRQRLAEKEFELILSDEALALIARAGFDPIYGARPLKRALQQEVENPLAQKILSGSLVP
GKPIKIDCAGSELAFEQ
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgcgactcgatcgtatgaccaataaatttcagacagcaatatccgatgctcagtcattg
gcattaggccgtgatcatcagtttattgaacctatacatctgatgatggccctacttaat
caagataatggttcaattcatcctctgctcactcaagctggcatacgagtaagttcactt
cgtgcactactcaatcaggaatttgaacgattatctcaagtggaagggaccggcggtgat
attcaattatcacaggcattgattagactcttaaatctgtgtgacaaattagcccagaaa
cgaaaagataaatatatttccagtgagctgtttatcctggcgtcgcttgagggaaatgac
actcttgcacagaatttaaagaaatccggtgcgactaaagagctgttagaagagacgatc
aagcaaattcgggcaggaaagaacgttgacgaccccaatgctgaagatcaacgtcaagcc
ttgaaaaagtacaccgtagatctgactgagcgcgcagagcagggtaagctcgatcctgtc
attggtcgtgacgacgagatccgtcgaactattcaagtactgcagcgtcgaagtaaaaat
aatccagttttaattggtgagcccggtgtgggtaagactgccattgtcgaggggctggcc
caacgaattgtcaatggtgaagtccccgaaggtatcaagaacaaacgtgttctttcatta
gatatgggctcattagtggcgggagccaaataccgtggagaattcgaagagcgactgaaa
gccgttcttaatgagctttatcaggaagaaggtcaggtcattctatttatcgacgaactg
catactatggttggtgcagggaagggcgatggcgcgatggatgcaggaaacatgcttaag
ccagcgctggcccgtggtgatctgcactgtgtcggtgcgacgacattagatgagtaccgt
cagtatattgagaaagatgcagcattagagagacgttttcaaaaggtgttggtcgaggaa
cctaatgtcgaagatacgatagcgatactgcgtggacttaaagagcgttatgaattacat
caccatgtagagatcaccgatccagcaatcgttgccgctgccagtatgtcaaatcgttac
gtctccgatcgcaagttacccgacaaggccatcgaccttatcgatgaagctgcgtcgagc
atacgtatacagatagactctaagcctgaacctttagacaaactagagcgacgctcgata
cagttaaagttggaggagcaggcattatctaaggagaccgatgaagcgagtctgcgtcgc
ctgtattctatacgcaaagagttgagaagcgtcgatgctaaggcatcagaactgaatgaa
atttggcatactgaaaaggcatccttggcgggaactcaacatataaaagcggatcttgag
caggcaaggttagatctcgatgtagctcgtcgagccagcgatctgactcgtatgtctgaa
cttcaatatggtcgaattcctgagctggagaagcagttagatttggcatctcaagcagaa
atgcaagatatgaccttactaagaaataaagtaacagatgttgagatagcagaagtactg
tcaaaagcgacgggaattcctgtctctaaaatgctggaaggtgagaaagagaagctcctt
catatggaagaagcgcttcactctcgggtcatagggcaaaatgaagctgtcgatgccgtt
tctaacgctattcgtcggagccgtgccgggctttcagatcctgaccgcccaatcggttca
tttctattcctgggccctaccggggtcggcaagactgagctttgcaaagctttagcgaag
tttttattcgatacggaatcagcattggttcgtatcgatatgtcggagtttatggagaag
cattctgtcgcgcgtttacttggcgcacctcctggatatgtcggctatgaagagggaggt
tatttaactgaagcggtaagaagaaagccgtattctgtcattttactcgatgaggtcgag
aaagcgcatccggatgttttcaatgttttacttcaggtgctggatgatgggcgtttaacc
gatgggcaaggtaggactgtagattttagaaataccgtggtaattatgacctctaatctt
ggctcagatgttattcaagatagatttacagaactctcttatggcgaaatgaagtcggag
gtgatgaacgtggttgttcatagcttcagacctgagtttcttaaccgaatcgatgagact
gtggtattccatcctctcgatgagaagcatattaagcatattgcgggtattcagatcgag
tcattaagacaacgccttgcagagaaagagttcgagctcatattgagtgacgaagcttta
gcgctcattgcacgagctggcttcgaccctatctatggtgccagaccattgaaaagagcc
ttgcaacaagaggtcgaaaacccgttagctcaaaaaatattgagtggttctcttgtaccc
gggaagccgattaaaattgattgtgcgggttcagagctcgccttcgagcaataa
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