Shewanella sediminis: Ssed_4298
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Entry
Ssed_4298 CDS
T00596
Name
(GenBank) preprotein translocase, SecY subunit
KO
K03076
preprotein translocase subunit SecY
Organism
sse
Shewanella sediminis
Pathway
sse02024
Quorum sensing
sse03060
Protein export
sse03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
Ssed_4298
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Ssed_4298
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Ssed_4298
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sse02044
]
Ssed_4298
Secretion system [BR:
sse02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
Ssed_4298
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecY
Orf78
Motif
Other DBs
NCBI-ProteinID:
ABV38902
UniProt:
A8G1C9
LinkDB
All DBs
Position
complement(5274357..5275697)
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AA seq
446 aa
AA seq
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MAKPGLDLKSAKGGFSELKTRLLFVIGAIIVFRAGSFVPIPGIDAAVLAELFNQQKGTIL
GMFNMFSGGALERASIFALGIMPYISASIIMQLLTVVHPALAELKKEGESGRKKISQYTR
YGTLVLGTFQAIGIATGLPNLVPGLVVNLGFGFYFVAVVSLVTGTMFLMWLGEQITERGI
GNGISILIFAGIVAGLPSAIGQTAEQARQGDLNVLVLLLIAVIVFAVTYFVVFVERGQRR
IVVNYAKRQQGRKVFAAQSTHLPLKINMAGVIPPIFASSIILFPGTLAQWFGQNESLSWL
SDFSLAVSPGQPLYSLLYASAIIFFCFFYTALVFNPRETADNLKKSGAFIPGIRPGEQTS
RYIDKVMTRLTLAGALYITFICLIPEFMLITWKVQFYFGGTSLLIMVVVIMDFMAQVQTH
MMSHQYESVMKKANLVNKANLDRFGR
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaccaggacttgatttaaaaagcgcgaaaggtggattttctgaactgaagact
cgcctcctgttcgtgattggtgcgattatcgtctttagagccggttcgtttgtaccaatt
cctggtattgacgctgctgtattagcagagctgttcaatcagcagaagggtactatctta
ggcatgtttaacatgttctctggtggtgcccttgaacgtgcttctatctttgcattggga
atcatgccgtatatttcggcgtcgattatcatgcagttgttgactgtcgtgcatcctgca
ctcgctgaacttaaaaaggaaggcgaatcaggtcgtaagaagatcagtcaatatacaagg
tacggcacattggtcctgggtacattccaggcaatcggtatcgcaacgggtctgccaaac
ctagttccaggtttagttgtaaaccttggatttggtttctatttcgttgcagttgtgagt
ttagtgacaggaacgatgttccttatgtggctaggtgaacaaattaccgaacgaggcatt
ggtaatggtatctcgatattaattttcgcaggtattgttgctggtctaccatctgctatc
ggccaaacggctgagcaggcgcgtcaaggtgacttgaacgtactcgtattattgttgatt
gcagttattgtatttgccgtaacttatttcgttgtatttgtggagcgtggacagcgtcgt
atcgtcgttaactatgcaaagcgtcagcagggccgtaaggtgtttgcagcgcaaagtaca
catttaccacttaagataaatatggcaggtgtgataccaccaatttttgcgtcgagcatt
attttgtttccaggcacactggctcagtggtttggtcaaaatgagtccctttcatggtta
agtgatttttcacttgctgtgtcaccaggacaaccgctctactcattattgtatgcatca
gcaatcatcttcttctgtttcttctatactgcgttggtgtttaacccgcgtgaaacagct
gataatttgaagaagagtggtgcgtttattcctgggatccgtcctggagaacagacttcg
cgttacattgataaggttatgactcgcttgacattagcaggcgcactgtacattaccttt
atctgtttaattccggagttcatgttaattacgtggaaagtacagttctattttggcggt
acttcactacttattatggtagtcgtaatcatggacttcatggctcaagttcagacccat
atgatgtctcatcagtatgagtctgtaatgaagaaagctaacctggtgaataaagcgaat
ttagatcgctttggtcgctaa
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