Sulfurimonas sediminis: FJR45_07675
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Entry
FJR45_07675 CDS
T07337
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
ssei
Sulfurimonas sediminis
Pathway
ssei03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssei00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FJR45_07675 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssei03019
]
FJR45_07675 (rny)
Messenger RNA biogenesis [BR:
ssei03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FJR45_07675 (rny)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KH_KhpA-B
KH_PNO1_2nd
HDOD
KH_2
DUF4388
KH_NusA_2nd
Motif
Other DBs
NCBI-ProteinID:
QOP43836
UniProt:
A0A7M1B2V0
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Position
complement(1430434..1432002)
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AA seq
522 aa
AA seq
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MLNEILLGGAIATVSGVVGFLISKKITGANFDVYVEQAVAKAKAIENEAQTLLERAKLKA
REIEHEAQKAFESAKERARADFAQREDELLRKEQSLKRLIQDEEKNIQNELNRIKAQKVN
LERNEKSLASLKKKYEEKIDEAVHTIEHSAGMTQEEAKKILLDKIEEKARGEIAHIVRKY
ENEARQEGERKANFILAQATSRFAGDFASERLTNLVHLESDELKGRIIGKEGRNIKALET
LLGVDIIIDDTPNAILVSSFNLYRRAIATKTLQLLIEDGRIQPARIEEIFKKVSEEFESK
ILTEGEELIAEMNIGVMHPELMKLIGRLRYRASYGQNALAHTLEVAHLAGIMAAEMGGDP
ILAKRAGLLHDIGKALTHDMDGNHVDLGAQICRRYNEDEVVINAIYAHHGQQEINSIECG
AVCAADALSAARPGARREVLESFLKRVTEIEDIASRHSGVKQAYAINAGREVRVIVNATL
VNDDESILMAREIAKEIEERVQYPGEIKVNVIRESRAVEFAK
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgttaaacgaaatactacttggtggtgcaattgcaacagtaagtggagtagttggtttt
ttaatttctaaaaagataaccggtgctaactttgatgtatatgttgaacaggcggttgcc
aaagcaaaggcgattgaaaatgaggcacagacacttcttgagcgtgcaaaactcaaagca
cgtgaaatagaacatgaagcacaaaaagcctttgagagtgccaaagagcgtgcacgtgca
gattttgcgcaaagagaagatgaacttttacgcaaagaacaaagtctgaagcgtttgata
caggatgaagaaaaaaacattcaaaatgagttgaacagaataaaagcacaaaaagttaat
ctggaaagaaatgaaaaatcactggcttcactgaaaaaaaagtatgaagagaaaatagat
gaagcagtccataccatagaacacagtgccggtatgacgcaggaagaggctaaaaagatt
cttcttgacaaaattgaagaaaaagcgcgtggcgagatagcacatattgtaagaaaatat
gaaaatgaagccagacaggaaggggagcgcaaagccaactttattttggcacaggcaacg
agtcgttttgccggagactttgcttctgagagattgacaaatctggttcatttggaaagt
gatgaactcaaaggccgtattatcggtaaagaagggcgaaatatcaaggctttggagaca
ttgctcggtgtcgatatcatcatagatgatacaccaaacgcaattcttgtgagcagtttt
aatttgtatcgtcgtgctattgcaacaaaaacactgcagttgctcatagaagacggaaga
attcagcctgcgcgaatagaagagatatttaaaaaagtttctgaagagtttgaatccaaa
attttaacagaaggtgaagaactcatagccgaaatgaatatcggtgttatgcatcccgaa
cttatgaaattaatcggaagattgcgttaccgtgcgagttacggacagaatgctttagcc
catacacttgaggttgcccatcttgcgggaattatggctgcagaaatggggggagacccg
atcttggcaaaacgggcaggacttttacatgatataggtaaggcattgacgcatgatatg
gatggaaatcatgttgatttgggagcccagatttgtcgcagatacaatgaagatgaagtt
gtcatcaatgcaatctatgcacatcacggacaacaggaaatcaactccatagagtgtggt
gcggtttgtgcggcagatgcactctcagcagcacgtccgggtgcgagacgagaagttttg
gagagctttttaaaacgtgttaccgagatagaagatatcgcatcacgtcacagcggtgtc
aaacaggcatatgcgattaatgccggacgagaagtcagagtcattgtgaatgctacattg
gtaaatgatgatgagtcaattctgatggcaagagaaattgcaaaagagatagaagagcgt
gtgcagtatccgggtgaaattaaagtaaatgttattcgggaaagccgggctgtggaattt
gccaagtaa
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