KEGG   Shewanella sedimentimangrovi: JYB85_00540
Entry
JYB85_00540       CDS       T07846                                 
Symbol
waaA
Name
(GenBank) lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase
  KO
K02527  3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
Organism
ssem  Shewanella sedimentimangrovi
Pathway
ssem00540  Lipopolysaccharide biosynthesis
ssem01100  Metabolic pathways
Module
ssem_M00060  KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:ssem00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00540 Lipopolysaccharide biosynthesis
    JYB85_00540 (waaA)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01005 Lipopolysaccharide biosynthesis proteins [BR:ssem01005]
    JYB85_00540 (waaA)
Enzymes [BR:ssem01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.99  Transferring other glycosyl groups
    2.4.99.12  lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
     JYB85_00540 (waaA)
    2.4.99.13  (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
     JYB85_00540 (waaA)
    2.4.99.14  (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
     JYB85_00540 (waaA)
    2.4.99.15  (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
     JYB85_00540 (waaA)
Lipopolysaccharide biosynthesis proteins [BR:ssem01005]
 Lipid A
  JYB85_00540 (waaA)
SSDB
Motif
Pfam: Glycos_transf_N Glyco_trans_4_4
Other DBs
NCBI-ProteinID: QSX37381
LinkDB
Position
128884..130152
AA seq 422 aa
MNRLLYSLLLYLLSPLLLLYLALRASRSADYRGRWAERFGLATLQPCDLLIHSVSMGETL
AALPLIRAILAKQPGIRITVTTTSPTGSAEVVKALGAQVQHCYLPFDLPWCVARFLRALN
ASELIIMETELWPNLIHLAKARGMKVQLANARLSAKSATSYHKWHRLTGPMLASIDRIAV
QTQIEAERFQALGVAAQRIAVCGSLKFDLQIDESRREQARQLRQQWGRETDPVWVAGSVH
PGEFAAVLAAHKALLTRFPQALLIFVPRHPEQFVAAAQAISDTGLSLARRSAKEAPIPGV
QVLLGDTMGELLTWYGVASIYKGAAFVGGTLIHSGGHNPLEPAAMGLPVALGPNHWDFTE
ISRLLQLAGNLTLVQDGEALGDLLSLWFTDEPARATAGAAGLAVVEQNRGAQERQLAWLS
QE
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgaatcgtttgctctattcgctgctcttgtacctgctatcgcccttgttacttctgtac
ctggctctgagagccagtcgcagtgccgactatcggggccgctgggccgagcgtttcggc
ctggccactctgcagccctgtgatctgttaattcactcggtctccatgggcgaaaccctg
gcggccctgcccttgatccgtgccatcctggcaaaacaaccgggtatcagaattaccgta
accaccaccagccccacggggtcggccgaagtggttaaggccctgggcgctcaggtgcag
cattgttatctgccctttgatttaccctggtgcgtggctcgctttctcagggccctgaat
gccagcgagcttatcatcatggaaaccgagctgtggccaaacctcattcatttggccaag
gccaggggcatgaaagttcagctggccaatgccaggttgtcggccaagtcggcgaccagc
tatcacaagtggcacaggctgaccggccccatgttggcgagcattgaccgcatcgcggtg
caaacccagattgaagccgagcgctttcaggcccttggggtagcagcgcagcgtattgcg
gtttgcggcagcctcaaatttgatctgcagatagacgagagccgccgagaacaggccaga
caactgcgacagcagtggggcagggaaactgatcctgtctgggttgccggcagtgtccat
ccgggggagtttgctgcggtattggccgcccataaggccctgttgacccggtttccgcaa
gccttgctgatatttgtcccccgccatccggagcaattcgttgcggcagcccaggccatt
agcgatacgggattgagtctggccagacgcagcgccaaagaagcaccgatccccggagta
caggtattgcttggagataccatgggtgagctgctgacctggtatggtgtcgcctcaatt
tataagggggctgcctttgtcggcggaaccctgatacacagtggcggtcacaacccgctg
gaacccgcggccatgggcttaccggtcgcacttgggcccaatcattgggatttcaccgaa
atcagccgcttactgcaactggcaggaaatctgaccttggtgcaagatggggaagctctg
ggtgatttattatcgctttggttcaccgatgagccggcgcgagccacagccggcgcagcg
ggcttggccgtagtcgagcagaatcggggggcacaggagaggcaattggcctggttgagc
caagagtga

DBGET integrated database retrieval system