Shewanella sedimentimangrovi: JYB85_03070
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Entry
JYB85_03070 CDS
T07846
Symbol
ssb
Name
(GenBank) single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
ssem
Shewanella sedimentimangrovi
Pathway
ssem03030
DNA replication
ssem03430
Mismatch repair
ssem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JYB85_03070 (ssb)
03430 Mismatch repair
JYB85_03070 (ssb)
03440 Homologous recombination
JYB85_03070 (ssb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssem03032
]
JYB85_03070 (ssb)
03400 DNA repair and recombination proteins [BR:
ssem03400
]
JYB85_03070 (ssb)
03029 Mitochondrial biogenesis [BR:
ssem03029
]
JYB85_03070 (ssb)
DNA replication proteins [BR:
ssem03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
JYB85_03070 (ssb)
DNA repair and recombination proteins [BR:
ssem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
JYB85_03070 (ssb)
TLS (translesion DNA synthesis) factors
Other SOS response factors
JYB85_03070 (ssb)
Mitochondrial biogenesis [BR:
ssem03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
JYB85_03070 (ssb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
tRNA_anti-codon
TFIIA
Motif
Other DBs
NCBI-ProteinID:
QSX37839
LinkDB
All DBs
Position
752160..752891
Genome browser
AA seq
243 aa
AA seq
DB search
MASRGVNKVILVGNLGQDPEVRYMPNGNAVANITVATSESWKDNQGQQQERTEWHRVVMF
GKLAEIAGEYLRKGSQVYLEGKLQTRKWKDQSGQDRYTTEVVVDQSGSMQMLGGRAQGQG
QGAPMGGQAQAGQQGGYSAPAQNQYAAAPQQGGYSAPAQGGYQQPQQAQPQAGFGQAPQQ
GAYQPKPQQAAPAYQPQQAPQQAPQQAPQQAPQQRPAPKPQAQPQQQNYTPDLDDGWDDD
IPF
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggccagtcgtggtgtgaataaggtgattctggtaggcaacctgggacaagatcccgaa
gttcgctatatgcccaatggcaacgccgttgccaatatcacagttgccaccagcgaaagc
tggaaagacaaccagggtcagcaacaggaacgcaccgagtggcaccgggtggttatgttc
ggcaagttggccgaaattgccggtgagtacctgcgcaagggctcccaggtgtacctggaa
ggcaagctgcagacccgcaagtggaaagatcagagcggtcaggacaggtacaccactgaa
gtggttgtagaccagagcggcagcatgcagatgctcggtggtcgtgcccagggtcaagga
cagggtgcccccatgggtggccaagctcaagctggtcagcagggtggatacagtgccccg
gcccagaaccaatacgctgctgcgccacaacagggcggttacagtgctccggctcagggt
ggttatcagcagcctcaacaggctcagccacaggctggttttggtcaggcacctcagcag
ggcgcctatcagcccaagccacaacaggcggctccggcttatcagccacagcaggcccca
cagcaggccccacagcaggccccacagcaggccccacagcagcgtccagcgcccaagcca
caggcacagccacaacagcagaactataccccggatctggatgatggctgggatgatgat
atcccgttctaa
DBGET
integrated database retrieval system
