Shewanella sedimentimangrovi: JYB85_16025
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Entry
JYB85_16025 CDS
T07846
Name
(GenBank) chemoreceptor glutamine deamidase CheD
KO
K03411
chemotaxis protein CheD [EC:
3.5.1.44
]
Organism
ssem
Shewanella sedimentimangrovi
Pathway
ssem02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
JYB85_16025
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ssem02035
]
JYB85_16025
Enzymes [BR:
ssem01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.44 protein-glutamine glutaminase
JYB85_16025
Bacterial motility proteins [BR:
ssem02035
]
Flagellar system
Chemotaxis proteins
Two component system proteins
JYB85_16025
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CheD
Motif
Other DBs
NCBI-ProteinID:
QSX36765
UniProt:
A0ABX7R105
LinkDB
All DBs
Position
complement(3595917..3596555)
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AA seq
212 aa
AA seq
DB search
MVLDSRQHAYPGFERTPRYWDNEQQSWVARVDPGEYYISNQDELIYTRLGSCVAACIWDP
LMGIGGLNHFLLPERALHEDWHQLTSYSCRYGNWAMEQLINSILSVGGLKSRLQAKIFGG
ASLGRMSVLNVGQSNIDFVRNYLAMEGIEVQAEDLGGPWPRKVLLHPQSGKVRVKRLAIE
GIRQIETEEARYLRGVTRQAAEPAPDSVELFD
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atggtgctggattctcgacagcatgcataccccggctttgaacgcacccccagatattgg
gacaatgagcagcagtcctgggtggcgcgggtcgatcccggggagtactacatcagcaat
caggatgaactcatctatacccgcctgggttcctgtgtggcggcctgtatctgggatccg
ctgatgggcataggcggcctgaatcattttttgttacccgagcgcgccctgcatgaggat
tggcaccagctgaccagttactcctgtcgctatggcaactgggccatggagcagctgatc
aacagcatactcagtgtcggtggcctcaagagtcgcctgcaggccaaaatcttcggtggc
gccagcctggggcgcatgtcagtgctcaatgtgggccagtccaatatcgattttgttcgc
aattatctggccatggagggaatcgaagtgcaggccgaagatctcggtggtccctggccg
cgcaaggtgctgctgcatccccaaagcggcaaggtcagggtaaagcgtttggccatagaa
ggtatccgccaaatcgagaccgaagaagccaggtacctgcgcggcgtgacccgccaggcg
gccgaaccggcaccggacagcgtggagctgttcgattag
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