Solea senegalensis (Senegalese sole): 122761004
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Entry
122761004 CDS
T07721
Name
(RefSeq) LOW QUALITY PROTEIN: cyclic nucleotide-gated cation channel beta-1-like
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
122761004
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssen04040
]
122761004
Ion channels [BR:
ssen04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
122761004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
122761004
NCBI-ProteinID:
XP_043872139
LinkDB
All DBs
Position
Unknown
AA seq
1582 aa
AA seq
DB search
MFNWVVKVVPQPPPETDAAAKTPSAAAIPSNTKQVQSPPQKNTGDVSEDSQVQTGVLGWL
SNGFVSALPQPTGSPRLSRASEDRCEEDGERSGVINWVTQGLTKVLPQPDDKYRETDTNE
EHTEVYDLATMPDHDPLPHIPVVEILSDDEEEPSQSSQFPPNVVKWVKDIVPQPVLRSSG
AITEPPIKSSHSSRSSLDKILSPPPESLSGISLDTDNKVSGVVSWFVSGLGLKLPQPVSQ
PKDDIEGAVAALQKASFKNKPDIVLEDVESDHEGQQEPDYKPPVPTTAVTPPSPETHHEQ
SSSLASMVVSHECGDSSPVPEQPESATRITQEDAETQTGRWTPFMESIKREAEDVALATM
EERLLVERMEMARVAEEVARQTAEMTIRQLAGEGQSIKLSLGSEELLEEPETELEESLTE
EEQKEETEELAVTFPESKEEATPQQTSPSLPPSPEPESEEESEPESEPESEPAVEEETGD
NHCETEPVTQQPQRAEGDSPDTNTDQAAQKEEEATGDDCGAPVSCDAFKSCLMRTPHTSE
CFGNINAFFKENGISSLKIPSMPKLPTQFSDVTKYCPTLPPELRQEFSQIRLTQVPRNIA
RSVSGLFPSGSEGWVDPTLSSLSQSFSNIPQKLSQVPTRTQQYLSNVQNRLNSLMPQDAX
EQQQQQQKQKQDNNQQDVELNRLVGPSPLSPPVHPHLRSRSPSPSSPSGSTLELPNVPSY
PRLPPIVSPPSKQLHSPSHQLSGLSNPAFFIEDDPDISPLRPTESSSISLRPAVNVEDVD
SDNERKGEGAGGGGGREEEQNSIPQILTPQDPKLTTLTVPVTPSGGRQSKGDKDGRNRGS
IWSKISKLHSQSEDDDDEGSTPVRAWPSQSSLHSTDDILKERPASSASQTSTVVNERLQE
LVKMFKHRTEKAKEKLIEPDSSDEDSVVTCSLLIEPDSSDEDSVVPSPPQPAPGAKPQDE
GDKEDQAGPSGGEEEGEVKSEAEMEQASSCCKVKAPRWMRACIRYRFPASIDPFTNLMYV
LWMFLVCLAWNWSLWFIPVRWAFPYHTPDNIYYWLLTDYLCDLIYILDITVFQPRLQFVR
GGDIVCDKKDMRKNYMKTRRFKFDVASLVPLELFYFKTGINPLLRLPRLLKINSFFEFNE
RLEAILTKAFIYRVIRTTTYLLYCLHCNACLYYWGSAFTGLGSTKWVYNGEGNSYIRCYY
FAVKSLITIGGLPDPTTLFEIVFQLINYFVGVFAFSIMIGQMRDVVGAATAGQTYYRTCM
DSTIKYMSSYRIPKDVQNRVKTWYNYTWQSQGMLDEQELLTQLPDKMRLDIAIDVNYSIV
SKVPLFQGCDRQMIFDMLKSLRSVVYLPGDYVCKKGEVGREMYIIKAGEVQVVGGPDGKT
VFVTLRAGSVFGEISLLAIGGGNRRTANVIAHGFANLFILDKKDLNEILVHYPESKKLLR
KKARKMLNKGKKPEPKEEAKDPPPAPAAPVRQETPKLLRAALEMKQRTSGLKGALAEVKR
KTSKSFISSQLSVSSSQPPPSPTSSSGPERDGDTPSPIFASSMTLNRCHSNSSTEDAVED
KGNESGSRKNDGEVRQEGRKER
NT seq
4749 nt
NT seq
+upstream
nt +downstream
nt
atgtttaactgggtggtgaaagtggtccctcaaccacctcctgagacagatgctgctgcc
aagactccctctgctgctgcaattccatcaaatactaaacaggttcagagccctccacag
aaaaacactggggatgtttcagaggacagtcaggtccagactggagtgttaggctggctg
tctaatggtttcgtcagcgctctgccgcagcccaccggctcccctcgactcagcagagca
tctgaagacagatgtgaagaggatggagaaaggtctggagtgatcaactgggtcactcag
ggtctgaccaaggttctgcctcagcctgatgacaagtacagagagacggacaccaacgag
gagcacactgaggtctatgatttagcaacaatgccagatcatgaccccctccctcacatc
ccagtggtggagatattgtcagatgatgaggaagaaccgagtcaatcctctcagttcccg
cccaacgtggtgaaatgggtgaaagacattgtccctcagccagttttacgatccagcggt
gcaatcacagaaccgccgatcaagtcgtcccactcctctcgctcctctctggacaaaatt
ctgtctccaccgcctgaatctctgagtggaatctcacttgacaccgacaacaaagtctct
ggtgtggtcagctggttcgtgtcaggactgggcctgaagttgcctcagcctgtgagtcaa
cccaaagatgatatcgaaggtgcagtggcggctctacagaaagcctcattcaaaaacaag
cctgacatagtgctggaggacgtggagtcagaccacgagggtcagcaggaacccgattac
aaacctcctgtgccgaccacagcggtgactccaccgtcaccagagacacaccatgagcag
tcctcttcgttggcatccatggtggtgtcccacgagtgtggtgactccagtccggtacca
gaacaaccagagagtgcaacaagaattactcaggaagatgctgagactcagacgggccgg
tggacaccgttcatggagagcatcaagagggaggctgaagatgtagctctggctaccatg
gaagaacgtctgctggtggagcgcatggaaatggcacgagtagctgaagaagtggccaga
cagacagcggaaatgaccatcagacagttggccggtgaaggacagtctatcaaactctca
ctgggcagtgaagagttgctggaggaacctgaaaccgaactagaagagagtcttacagag
gaggaacagaaggaggagacagaggaactagccgtcacatttccagaatcaaaggaggaa
gctacaccgcagcagacttctccctctctgcctccaagtcctgaacctgaatcagaagaa
gaatctgaacctgaatctgaacctgaatctgaacctgctgtggaagaagagactggagac
aaccattgtgagactgaacctgtgacccagcagccacagagagcagagggagacagtcct
gacaccaacactgaccaagcagctcaaaaagaggaggaagctactggggatgactgtggt
gctccagtcagctgtgatgcatttaagagctgcctgatgcgcacccctcacacctcagag
tgcttcggcaacatcaacgccttcttcaaagagaacggcatctcttcgctgaaaataccc
tccatgcctaagctgcccacccagttttctgacgtgaccaagtactgtcccacccttccc
cctgagttacgccaagagttctcccagattagactaacgcaggtgcccaggaacatagcc
cggtctgtgtctgggcttttccccagtggctcagagggttgggtcgaccccacgctctcc
agcctctcccagagcttttcaaacatccctcagaagctctcccaggttccaacacgaacg
cagcagtacctgagcaacgttcagaaccgcctgaacagccttatgcctcaagatgcctaa
gaacaacaacaacagcagcaaaaacagaagcaggacaataatcagcaagatgtagaactc
aaccgactcgtcggaccctcccctctttctcctcccgtccatcctcatctcaggtcccgc
tccccgtctccctcctcccccagtggcagcaccctcgagttgcccaatgtgccgtcctat
ccgcgcctgccgccgattgtcagccccccgtccaagcagctccactccccgtcccaccag
ctgtctggtctctctaacccggcattcttcatcgaagacgatccagacatttctccactg
agacccacagagagctccagcatcagcctccgtccagctgttaacgtagaggacgttgac
tccgacaatgagagaaaaggagaaggagcgggaggaggaggaggaagagaggaggagcag
aatagcatcccgcagattctcaccccacaggatcccaaacttacaaccctcactgttcct
gtcactccgtctggaggtcgtcagagtaaaggagacaaagatggaaggaatcgtggaagt
atctggagtaagatttcaaagcttcattctcaaagtgaagatgatgatgatgaagggagc
acacctgtcagagcctggcccagccagtccagcctgcacagcacggatgatattctgaaa
gagcgcccggcgtcttcggccagtcagaccagcacagtggtgaacgagcgtttgcaggag
ctggtcaagatgttcaaacacagaacagagaaggccaaagagaaactcatcgagcccgac
agctcggatgaagacagcgtcgtaacctgttcacttctcatcgagcccgacagctcggat
gaagacagcgtcgtaccctctcctcctcagcctgctcctggagcgaagccacaggatgag
ggagataaggaggatcaagcaggtccatcaggaggagaagaagaaggagaagtgaagagt
gaggcagagatggagcaggctagcagctgctgtaaggtgaaagctccacggtggatgcga
gcctgtatacgctaccgtttccctgccagcatcgaccccttcaccaacctgatgtatgtg
ctgtggatgttcttggtgtgtctcgcgtggaactggagtctgtggttcatcccggtgcgc
tgggcctttccctatcacacgccagacaatatctactactggcttctgaccgactatctg
tgcgacctcatttacatcctggacatcaccgtcttccagccacgtcttcagtttgtccgt
ggaggggacatcgtgtgtgacaaaaaagacatgaggaagaattacatgaaaacaagacgc
ttcaaattcgatgtcgccagtcttgtccctctggagcttttctactttaaaaccggcatc
aaccctctgctgcgcttacctcggctgctgaagatcaactccttcttcgaattcaatgag
cgtctcgaggccatcttgaccaaagccttcatctacagagtaatccggaccaccacctat
ctcctgtattgtctccactgtaatgcctgtctgtactactggggctctgccttcacagga
ctgggatccaccaagtgggtgtacaacggcgagggcaacagttacattcgctgttactac
tttgcggtgaagtccctgatcaccatcggaggattaccagatcccaccaccctgtttgag
atcgtcttccagctaatcaactactttgtgggagtctttgccttctctatcatgattgga
cagatgcgtgacgtggttggtgcagccacagcgggtcagacctactaccgcacatgtatg
gacagcactattaaatacatgtcctcatatcgcatccccaaggatgtccagaaccgcgtc
aaaacctggtacaactacacctggcaatctcaaggcatgcttgatgagcaggagctgctg
actcagttgccagataaaatgcgcctggacattgccatagatgtcaactactccattgtg
agcaaagtccctctattccagggttgtgacagacagatgatctttgatatgctgaaaagc
ctgcgctctgttgtctacctccctggggactatgtctgcaaaaagggtgaagtgggacgg
gaaatgtatatcataaaggcaggggaagtgcaggtggttggaggacctgatgggaagacg
gtgtttgtcactctaagagcaggatctgtctttggagagatcagtctgttggctataggt
ggaggtaacaggcgcacagctaacgtgatcgctcatggctttgccaatctcttcattctg
gacaagaaagacctgaatgaaatcctggtccactaccctgagtccaagaagctgctccgc
aagaaggccagaaagatgctcaacaagggaaagaaacctgagcccaaagaggaggctaag
gatcctccaccggcccctgcagcccctgtcaggcaggagactcccaaactgctgagagct
gctcttgagatgaaacagaggacctctggactgaaaggagctctggctgaagtcaaacgg
aagaccagcaagtcctttatctcatcacagctctctgtctcatcttcccagcctcctcca
tctcccacttccagctctgggcctgaaagagatggagacacgccctcgcccatctttgcc
agttctatgacacttaaccgctgccatagcaacagctccacggaggatgctgtggaggat
aaaggcaacgagagtggttcgaggaaaaatgatggggaagttaggcaggaaggaaggaaa
gagaggtga
DBGET
integrated database retrieval system
