Solea senegalensis (Senegalese sole): 122765002
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Entry
122765002 CDS
T07721
Symbol
ift88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ssen03037
]
122765002 (ift88)
Cilium and associated proteins [BR:
ssen03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
122765002 (ift88)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_8
TPR_6
TPR_19
TPR_14
TPR_7
TPR_16
TPR_11
ANAPC3
SNAP
TPR_17
TPR_9
ARM_TT21_4th
TPR_CcmH_CycH
TPR_10
ARM_TT21_5th
MIT
TPR-S
TPR_15
ARM_TT21_C
DUF2225
HEAT_Nup120
HAT_PRP39_C
ARM_TT21
ARM_TT21_N
SHPRH_helical-1st
Consortin_N
ARM_TT21_2nd
FumaraseC_C
Motif
Other DBs
NCBI-GeneID:
122765002
NCBI-ProteinID:
XP_043874951
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All DBs
Position
LG2:1336103..1357302
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AA seq
834 aa
AA seq
DB search
MENVHLVPEDEDLYSGYNDYNPTFDSEELENDVGFQQAVRTSHGRRPPMTAKFPGTAIGA
RPLATSFGPRIPMTSSMGRPVTGAVQDGAARPMTAVRAAGYTSSLTRGSTFDPLGQSRGP
APALESKNEDTPEEKIKILEKKVNDLIEESCMAQSMGALQLALEKAKEAGRKERALVRQR
EQSGNGDHINLDLTYSVLLNLANQYENNEMYPEALNSYQVIVKNKMFSNAGRLKVNMANI
YFKQKNYPKAIKFYRMALDQISNAHKEMRIKIMQNIGVIFVRMGQYSDAITSFGHIMSES
PNVKTGFNLILCYYAIGDREMMKKSFQNLISVPLGVDDEDKYIPSNDDTNSNMVIEAIKN
DKLHQMERDLKSLAEKFIMTAAKLIAPSIEASFAAGFDWCVDMVKSSQYVELANDLEINK
AITYLRQKDFNQVEAVETLKTFEKKDSRVKSAAATNLSFLYFLEKDYDQADRYSDLAMNA
DRYNPAALINKGNTVFIRHDYEKAAEFYKEALRNDSSCTEALYNLGLSYKKLNRLDEALD
CFLKLHAILRNSAQVMYQLAQVYELLEDPHQAIEWLMQVISVIPTDPKVLAKLGDLHDGE
GDKSQAFQCYYESFRYFPSNIDVIEWLGAYYIETQFCEKAIQYFERATLIQPTQVKWQLM
VASCYRRSGNYQKALDTYKDIHRKFPENVECLRFLVRLCTDMGLKEVQEYATRLKKVEKM
KEIREQRVKSGREGSARSRREGREGSAGSAGIAEDVKTDSSHSSNSTKGERLSAKMRSLP
ASNEPYEASNQKELDASYMDPLGPQMERPKTGAKRRVEEDDFADEELGDDLLPE
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggagaatgtgcatctcgtaccggaggacgaggacctttattcgggttacaacgactat
aatcccacatttgactccgaggagttggagaatgatgtgggcttccagcaagcagtcagg
acgagtcatggaagaagaccccctatgactgcgaaatttcctggcactgccattggagct
cgacctttagctacttcatttggtcctcggatccctatgacctcttctatgggcagacca
gtaactggagctgtacaggatggagccgctcgaccgatgactgccgtcagagccgctggt
tacacgtcctctctgacccgtggatcaacctttgaccctctgggccagtccagaggtccc
gcccctgcgcttgaatcaaagaatgaggacacgcccgaggagaagatcaagatcctggag
aagaaagtgaacgacctgatcgaggagagctgcatggcacagagcatgggagccttacaa
ctggctcttgaaaaagctaaagaggcaggaaggaaggagcgagccctggtgagacagaga
gaacagtctggaaatggggaccacatcaatttagatctcacctactcagttttgctgaac
ctcgccaaccagtatgagaacaatgaaatgtacccagaggctctgaacagctaccaggtc
atagtgaagaacaagatgttcagtaacgcaggcagactgaaggtcaacatggccaacatc
tacttcaaacagaaaaactaccccaaggccatcaagttctaccgcatggccctggaccag
atctccaacgcccacaaggagatgaggatcaagatcatgcagaacatcggcgtgatcttc
gtgcgcatgggccagtactcggacgccatcacgtcgttcggacacatcatgagcgagagc
cccaacgtcaagacgggcttcaacctcatcctgtgttactacgccatcggcgaccgcgag
atgatgaagaagtccttccagaacctcatctcggtgccgctgggcgtcgacgacgaggac
aagtacatcccgtccaatgacgacaccaactcaaacatggtcatcgaggccattaagaac
gacaagcttcaccagatggagagagatctaaagtctttggctgagaagttcatcatgact
gcagccaaactcatcgctccgtccatcgaggcttcgtttgctgctggatttgactggtgc
gtggacatggtaaagagttctcagtacgtggagctcgccaacgatctggagatcaacaaa
gccatcacttacctccgacagaaggacttcaaccaggttgaggcagttgaaaccctgaaa
acatttgagaagaaggacagcagagtgaagagcgctgcagccaccaacctctcgttcctt
tactttctggagaaggactacgaccaggccgaccgatattccgaccttgccatgaacgcc
gaccgctacaacccggcggcgctcatcaacaagggcaacaccgtgttcatcagacacgac
tacgaaaaggcggcagagttctacaaagaagcgttgaggaacgactcctcctgcactgag
gctctctacaacctgggtctgtcctacaagaaactgaatcgtctggacgaggctctggac
tgtttcctgaagctccacgccatcctgaggaacagcgcccaagtcatgtaccagctggct
caagtctatgagcttctggaggatccgcatcaggcgatcgagtggctgatgcaggtcatc
agtgtaatccccactgaccccaaggtgctggccaaactgggagacctgcatgatggcgag
ggggacaagtcccaggctttccagtgctactatgagtctttcaggtacttcccctctaac
atcgatgtgatagagtggctcggcgcctactacatcgagacccagttctgtgaaaaggcc
attcagtactttgaaagagccacactcatacaaccaacacaggtgaagtggcagctgatg
gtggcaagctgctacagacgaagtggaaactaccagaaagctttggacacgtataaagac
atccaccgcaagtttccagaaaatgtggaatgtctgcgtttcttggtgaggctttgcaca
gacatgggactgaaggaggttcaagaatacgccaccagactgaaaaaggtggagaagatg
aaggagatcagagaacagagggtgaagtcggggcgtgagggcagtgccagaagtcggaga
gaaggcagagagggcagcgctgggagtgcaggcattgcagaggatgtcaaaacagacagc
agccacagcagcaacagcactaaaggcgagcgactcagcgccaagatgaggtcacttcct
gcctctaacgagccttacgaggccagcaaccagaaagagctcgacgcgtcttacatggac
ccactgggacctcagatggagagaccgaagacgggagcaaagaggcgagtggaggaggac
gacttcgcggacgaggagctgggagacgacctgctgccggagtag
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