Solea senegalensis (Senegalese sole): 122765633
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Entry
122765633 CDS
T07721
Symbol
scn1lab
Name
(RefSeq) sodium channel, voltage-gated, type I like, alpha b isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssen04040
]
122765633 (scn1lab)
Ion channels [BR:
ssen04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
122765633 (scn1lab)
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
Spem1
IQ
ATP-synt_B
New_glue
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
122765633
NCBI-ProteinID:
XP_043875965
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All DBs
Position
LG2:complement(26170727..26205828)
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AA seq
2024 aa
AA seq
DB search
MAQLLVPPGPDSFHPFVPESLAAIERCIAEEEARRPRSERRSDSDDENGPKPNSDLEAGK
SLPFIYGDIPPKLVSTPLEDLDTFYSSQKTFIVLNRGKTIFRFNATPALYILNPFNPLRR
IAIRVLVHSMFSMLIMFTILTNCAFMTLSNPPEWAKNVEYTFTGIYTFESLIKILARGFC
VGKFTFLRDPWNWLDFSVILMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVRMPVGNATNGSNITGNDTMLF
SNTSIDINTTFVQNPAENPFNWTEYMSDENNYYYLPGRRDALLCGNGSGAGFCPEGFICL
KAGRNPDYGYTSFDTFSWAFLSLFRLMTQDYWENLYQQTLRAAGKPYMIFFVLVIFLGSF
YLVNLILAVVAMAYDEQNQATIEEAQQKEEEFQAMLEQLKRQQEEAQVAAAAATESGEYS
GRGGPTSESSSGTSKLSSKSAKERRNRRKKRKQREEEEEREGRKFHKSESEDSIKRSSFR
FSIDANRLSYEKRCSSPNQSLLSIRGSLLSPRRNSRASLFSFRGRARDMGSENDFADDEH
STFEENDSRRGSLFLPRRLERRCSAVSQTSLGAPRVMLPANGKMHCAVDCNGVVSLVGGT
SVTTSPVGLLLPEGTTTDTELKKRRAGFRKPSMDYLEEPGPRQRAMSVASILTNTMEELE
ESRQKCPPCWYRFANTCLIWDCCPAWLKIKDVVNMVVMDPFVDLAITICIVLNTLFMALE
HYPMTDEFDTVLSVGNLVFTGIFTAEMCFKIIALDPYYYFQEGWNIFDGIIVSLSLMELG
LANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVG
MQLFGKSYKECVCKISEDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQSMC
LIVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDSEMNNLQIAVGRIQRGIAFVKS
TVRQFLRSLCFGGASKATGLAEESKPLDELHSNGKGNCISNHTTVEITKEPSRGYITEGN
GRPGGGLVVGVRAGGDTTVKYPIEECDYMSFIHNPSLTVTVPIAVGESDFENLNTEDFSS
DSSDVEGSKEKLDVEPKHLSSSEGSTVDIRPPGDGVDSVELEPEESLDPEACFTEGCVRR
FQCCQINEEGSHYKSWWTLRKTCFIIVEHNWFESFIIFMILLSSGALAFEDIYIEQRRTI
KTMLEYADKVFTYIFILEMLLKWVAYGFVKYFTNAWCWLDFLIVDVSLVSLVANALGYSE
LSAIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNL
FAGKYYYCVNTTNDEVFPISIVNNKTDCLNLVNDSARWKNVKINFDNVGAGYLALLQVAT
FKGWMDIMYAAVDSRQLESQPKYEENLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQK
KKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPANAFQGCVFDCITKQAFDIVIMIL
ICLNMVTMMVETDDQTNEMDNILFWINLVFIVLFTGECVLKMISLRHYYFTIGWNIFDFV
VVILSIVGMFLSDVIERYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPAL
FNIGLLLFLVMFIYAIFGMSNFAYIKREAGIDDMFNFETFGNSMLCLFQITTSGGWDGLL
APILNKREPDCDSQMEHPGNSYKGNCGNPSVGIFFFVSYIIICFLIVVNMYIAVILENFS
VATEESAEPLSEDDFEMFYEVWERFDPDATQFMEYSKLSDFADALDPPLRMPKPNMIQLI
SMDLPMVSGERIHCLDILFAFTKRVLGEGGEMDVLRGQMEERFMASNPSKVSYEPITTTL
RRKQEDMSAVIIQRAFRRYMIRQAMKKSSILYKEKMKEGIRDPDKDVMVISKFHENSTSE
KTDMTPSTASPPSYNSVTKSDKDKYEKENRDKENKGKDLKDRKK
NT seq
6075 nt
NT seq
+upstream
nt +downstream
nt
atggcacagctgcttgtaccgcccggacctgacagcttccaccccttcgtccccgagtca
ctggccgccatcgaaaggtgcatcgccgaggaggaggcccggagaccacggtcggagcgt
cgcagcgacagcgatgatgaaaatgggccgaagcccaacagtgaccttgaggcggggaaa
tctctgcccttcatttatggggacatccctcccaaactggtgtccacccctctggaggac
ttggacaccttctacagcagtcagaagaccttcatagtattgaatcgcgggaagacaatc
ttccgtttcaatgccacccctgccttgtacatcttaaaccccttcaaccccctaagaaga
atagctatcagagttttagtacactcgatgttcagcatgttgatcatgttcaccatcctg
accaactgtgctttcatgaccctaagtaatcccccagaatgggccaagaatgtagaatac
acattcacagggatctataccttcgagtcccttataaaaatcctggcaaggggcttctgt
gtggggaagttcactttcctccgggacccatggaactggctggatttcagtgttatcctc
atggcatatgtcacagagtttgtggacctgggcaatgtctcagcactacgaaccttcagg
gttctacgagccctgaaaactatttcagtcatcccaggcttgaagactattgttggtgcc
ctgatccagtcggtaaaaaagctgtcggacgtgatgatcctcactgtgttctgcctcagc
gtctttgccctcattggcctgcagctcttcatgggcaacctgaggcagaagtgcgtgcgc
atgcccgttggcaatgccaccaacggcagcaacatcaccggcaatgacaccatgcttttc
agcaacacctcgatcgatatcaacaccacgtttgtgcagaaccccgcggagaaccccttc
aactggacagagtacatgagtgatgagaataattactattacctccctggccgtagagat
gctctgctctgtgggaatggcagtggcgctgggttctgtccagaaggctttatatgtttg
aaagctggtcgcaatccagattatggctacacaagctttgacaccttcagctgggccttt
ctctccctgttccgactcatgacccaggactactgggaaaatctctaccagcagacttta
cgtgctgctgggaaaccttacatgatcttcttcgtgctggtgatcttcctgggctccttt
tacttggtcaacctgatcttggctgtggtggccatggcttatgacgagcagaaccaggcg
accatcgaggaggctcagcagaaggaggaggagtttcaggccatgctggagcagctgaag
aggcagcaggaggaggcacaggttgccgcagcagcagccacggagagcggagagtacagc
gggagagggggccccacctccgagtcctcctcagggacttctaagctgagctcaaaaagt
gccaaggagcgacgcaacaggcggaagaagaggaagcagcgggaggaggaagaagagagg
gaagggcggaagttccacaagtctgagtctgaggacagcatcaaaagatccagcttccgc
ttttctattgatgccaatcggctctcttatgagaagagatgttcctcccccaaccagtct
ctcctcagtattcgtggatccctgctttcacctcggaggaacagccgagcgagcctgttc
agcttccgcggccgggcgcgcgacatgggctccgagaacgacttcgctgacgatgagcac
agcaccttcgaggagaatgacagtcgcagaggctctctgttcctgccacggcgcctggag
cgccgctgcagcgccgtcagtcagacgagcctcggggcgccgcgggttatgttgcctgcc
aatggcaaaatgcactgcgctgtagactgcaacggtgttgtgtcactggtcggtggaacg
tctgtaacaacctcccctgtaggtctcctgctgcctgagggtacaactacagatacagag
ctgaaaaaacgtcgggcaggctttcgcaagccgtccatggactatcttgaagagcccgga
ccccgacagagagccatgagtgtggccagtatcctcaccaacacgatggaagagctggaa
gagtcaagacagaagtgccccccctgctggtatagatttgccaacacctgtctgatctgg
gattgttgtccggcgtggctgaaaatcaaggatgtcgttaacatggtggtgatggacccg
tttgtggatctggcgatcacaatttgcatcgtcctcaacaccctcttcatggccttggag
cattaccccatgaccgatgagtttgacactgtcctctcagttggaaacctggtgtttaca
ggcatcttcacagcagagatgtgtttcaagatcatcgccttggatccctactactacttc
caggagggctggaacatctttgacggcatcatcgttagtctcagtctaatggaacttggc
ttggccaacgtcgagggcctgtctgtgcttaggtcctttagattgcttcgagtgttcaaa
ctggccaagtcatggcctactttaaacatgctgatcaagatcattggtaactctgtgggt
gctctggggaacctcactctggtgctggccatcattgtcttcatcttcgctgtggtgggc
atgcagctgtttggcaagagctacaaggagtgtgtgtgtaagatctctgaggactgcgag
ctgccacgctggcacatgcacgatttcttccactccttcctcatcgtgttccgggtgctg
tgtggggagtggatcgagaccatgtgggactgcatggaggtggcgggacagagcatgtgc
ctaatagtcttcatgatggtcatggtcatcggaaaccttgtggtacttaacctcttcctg
gctctcctcctgagctcgttcagtgctgacaacctggcggcaactgacgacgacagcgag
atgaacaacctgcagattgcagtgggacgcatccagcggggtatcgccttcgtcaagtcc
acagtgcgccagttcctgcgcagcctctgctttggcggggcaagtaaggcaaccggcctg
gcagaggagagcaaacccttggatgagttacacagcaacggcaagggcaactgcatctcc
aatcacactacagtggagatcaccaaagaaccaagtcgggggtacataacagagggcaat
ggacggcccggaggggggctggtggtaggagtcagagctggtggggacactacagtgaaa
tatcccatagaggaatgtgactacatgtcattcattcataaccccagcctgacagtcaca
gtgcctattgctgtgggcgagtccgactttgagaacctcaacacggaggacttcagcagc
gattcgtcagacgtggagggcagcaaagagaagctcgatgtagagcccaagcatctgagc
tcgtcggagggcagcacagtcgatattcgccccccaggagacggggtcgactcggtggag
ctggagccagaagagtctctggacccggaggcctgcttcacagagggctgtgtgcgcagg
ttccagtgttgccagatcaacgaggagggcagccattataagagctggtggacactcagg
aagacctgctttatcatagtggagcacaactggtttgagtccttcatcatattcatgatc
ctgctcagcagcggcgcgctggcgtttgaggacatttacattgagcagcggagaaccatc
aaaaccatgctggagtatgccgataaggtctttacctacatcttcattctggagatgctg
ctcaagtgggtggcgtacggctttgtcaagtactttaccaacgcctggtgctggctcgac
ttcctcatcgtggacgtttccctggtcagcctggtagccaatgctctgggctactctgag
cttagcgctatcaaatctctgaggacactccgagccctccggcccctgagggccctgtct
cggtttgagggcatgagggttgtagtgaacgcgctgctgggggccattccctccatcatg
aacgtgctgctggtctgcctcatcttctggctcatcttcagcatcatgggcgtcaacttg
tttgcggggaagtactactactgcgtcaacaccaccaacgacgaggtcttccccatcagc
atcgtcaacaacaagaccgactgcctgaacttggttaacgacagcgcccgctggaagaat
gtcaaaatcaacttcgacaacgtcggggccggctatctggctctgttgcaagtggcaaca
tttaaaggttggatggacataatgtacgcggctgtggactctcgacaattggaatcccag
cccaaatatgaagagaacttgtacatgtacctctactttgtcatcttcatcatctttggc
tccttcttcaccctcaacctgttcattggtgtcatcatcgacaacttcaaccagcagaag
aaaaagtttggaggtcaggacatcttcatgacagaagagcagaagaaatactacaacgcc
atgaagaagttgggttccaagaaaccacagaagcccatacctcggcccgcaaatgcgttt
caaggctgcgtgtttgactgcatcacaaagcaggcctttgacattgtgatcatgatcctc
atctgccttaacatggtgaccatgatggtggagacggacgatcagaccaatgagatggac
aatatcctcttttggattaaccttgtcttcatcgtgctcttcactggagagtgtgtgctg
aagatgatctccctgcgtcattattacttcaccattggctggaatatatttgactttgtg
gtggtgattctgtccattgtaggtatgtttttatctgatgttattgagagatactttgtg
tccccgacactgttccgagtgatccgtctggccagaattggccgaatcctccgtctcatc
aaaggtgccaaaggaatccggacgcttctctttgccttgatgatgtcactccccgccctc
ttcaacattggcctcctcctcttcctggtcatgttcatctatgccatcttcggcatgtcc
aactttgcctacatcaaacgcgaggcgggaatcgacgacatgttcaatttcgagaccttt
gggaacagtatgctctgtttgtttcagattaccacctcaggtgggtgggacggactgttg
gcgcccattctgaacaagcgggagcctgactgtgacagccagatggagcatccgggcaac
tcctacaaaggcaactgtggcaacccctcagtgggcatcttcttctttgtcagctacatc
atcatctgcttcctcatcgtggtcaacatgtacatcgccgtcatcctggagaacttcagt
gtggcgacagaggagagtgccgagccgctgagtgaggacgacttcgagatgttctatgaa
gtgtgggaacgattcgatccagacgcaactcagttcatggagtacagtaagctctccgac
tttgcagatgccctcgatccgccattgcgcatgcccaagcctaacatgatccagctcatc
tccatggacttgccgatggtgagtggcgagcgcatccactgcctcgacatcctgtttgcc
ttcaccaagcgagtgttgggcgaaggcggcgagatggacgtgttgcgcggacagatggag
gagcgcttcatggcctccaacccctcgaaggtgtcttacgagcccatcaccaccaccctc
cgccgcaaacaagaggacatgtcggccgtgatcattcagagagccttccgacgctacatg
atccgtcaggccatgaagaagtcctccattctctacaaggagaagatgaaggagggcatc
cgtgacccggacaaggacgtgatggtcatcagcaagttccacgagaactccacctcggaa
aaaacggacatgacgccgtccaccgcctccccaccctcctacaacagtgtgacgaaatca
gacaaggacaaatatgagaaagagaacagggacaaggaaaacaaagggaaagacttgaaa
gacagaaagaaatag
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