Solea senegalensis (Senegalese sole): 122767005
Help
Entry
122767005 CDS
T07721
Symbol
dcp1b
Name
(RefSeq) mRNA-decapping enzyme 1B
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122767005 (dcp1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122767005 (dcp1b)
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122767005 (dcp1b)
mRNA degradation factors
5'-3' decay
Decapping complex
122767005 (dcp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
Motif
Other DBs
NCBI-GeneID:
122767005
NCBI-ProteinID:
XP_043878245
LinkDB
All DBs
Position
LG3:complement(29374613..29386959)
Genome browser
AA seq
650 aa
AA seq
DB search
MTATSAGSCLTAKGLDISLAALKRQDPYINNIVDVASQVALYTYNNRSNEWEKTEVEGTL
FIYTRLASPRHGFTIMNRLRMENLTEPITKDLDFQLQDPFLLYRNARLVIHGIWFYDKVD
CQRIAQRMKILTHQEQVLAQSQGGWLLPAGVEGRRVVGGGGRGRGRGQVVGGRGGDVGGG
GGSGSGGGGGGGGSEGKAVDIIQMLTKARTEYDKVKCTPEPKEIGGSSVLYGNPNLIKPI
PVKPNTQDSEGAEPKSLSLATLFGSQHQHHHSSKTATATAEPGSAAGKGSRPPVARTLTY
DDTLINSGRSVHRSDGGSRAVTGEDDHHQQELLQHCPAIQKLMQGQRGVLQTLSESPENR
LCDNGVPMDHHHHHHHHQQHHHHHHQQQQQQLQQHDPIKKLFQAQLPPPPSSSSFSPAAP
SFCSIPPPHPLQQHPHLTSKSLMVDSGSCSHLQVQQNQQLFFSLSKPQTDGGHNIMSLSA
LQKAGLSCQMPGVVSPHELLQKLQLVQQEQSLASSEAPRHCPGLAPRFLGSTQSQSACSV
VGPGPNQIAATVGQKAAPQLPVISETISPHQIPATVAPNLLLSPSVFSQAKSGSGSSAVA
QENCHEVPVLSRSQLQATLLHLIQTDGSFLDTIHKTYVSRCANNSSTKYQ
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgacagctacttcagcagggagctgccttaccgcgaaaggactggacataagtctggct
gccctgaaacgacaagacccctacatcaacaatatcgtggacgtggccagtcaggtggct
ttgtacacttataacaacaggtcaaatgaatgggagaagacagaggtggaaggaacactt
tttatctacacaaggttggcatctcccaggcatggcttcaccataatgaacagactccgc
atggagaatttgacagagccaatcaccaaggacctggactttcagctccaggaccccttc
ctgctgtaccgcaatgcacgcttggttatccatgggatttggttctatgataaggtggat
tgtcaacgaattgcccagagaatgaagattctaacccatcaggagcaggtccttgctcag
tctcagggcggctggctgttaccagcaggagtagaaggaagaagagttgttgggggaggg
ggaagaggaagaggaagaggacaagttgttggaggaagaggaggagatgttggaggagga
ggtgggagtgggagtggtggagggggcggcggaggaggaagtgaagggaaggcagtcgac
atcatccagatgctgactaaagcgcgaacagagtatgacaaggtaaagtgtactccagag
ccaaaggaaattggtggcagcagtgttctatatggaaaccctaacctgatcaaaccgata
cctgttaaaccaaacactcaggacagtgaaggtgctgaacccaaatctctctctctggcc
actttgtttggttctcagcatcaacatcaccactcatccaaaacggccacagccacagca
gaacccgggtcagcagcagggaaaggctctcgcccaccagtagcccgcacgctgacctat
gatgacaccctgataaactctggcagaagtgttcacagatcagatggagggagcagggca
gtaactggggaggatgatcatcatcagcaggagctgctgcagcactgtccagccatccag
aagctcatgcagggacagagaggtgtccttcagaccctgtctgagtcccccgagaacagg
ctgtgtgacaacggggtgccaatggatcatcatcaccaccatcatcatcatcaacagcac
catcatcatcaccatcaacagcaacagcaacagcttcaacaacacgacccaatcaaaaaa
cttttccaagctcaactgcctccccctccttcctcgtcctccttctcccctgctgctccc
tctttttgctccatcccgcctccccaccctctgcagcagcacccccacctcacctcaaag
tccttaatggtggattctgggtcatgttcccaccttcaagttcaacaaaaccagcagctg
tttttcagcctttctaagcctcaaacagacggtgggcacaacattatgtcattatcagct
ctacagaaagcaggtctgtcttgccagatgcctggtgtggtgtctcctcatgaactcctc
caaaagctccagttggttcagcaggagcaaagcttggcttccagtgaagctcctcgacac
tgtcccggattggcccctcggttcctgggatccactcagagtcaaagtgcctgctctgtt
gtgggtccaggcccaaatcagattgcagctactgtaggtcaaaaggctgctccgcagttg
ccagtcatttctgagaccatctccccccatcagataccagccactgtggcccccaacctg
ctcctctctcccagtgtgttttctcaggcaaagtctggcagtggttcatcagcagttgct
caggagaactgccatgaggtgccagttctgtccaggtcccagctccaagccacactgctg
cacctgatccagactgatggctcattcctggacaccatccataagacctacgtcagccgt
tgtgctaacaactccagcaccaagtaccaatga
DBGET
integrated database retrieval system
