KEGG   Solea senegalensis (Senegalese sole): 122768459
Entry
122768459         CDS       T07721                                 
Symbol
sec13
Name
(RefSeq) protein SEC13 homolog
  KO
K14004  protein transport protein SEC13
Organism
ssen  Solea senegalensis (Senegalese sole)
Pathway
ssen03013  Nucleocytoplasmic transport
ssen04141  Protein processing in endoplasmic reticulum
ssen04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:ssen00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    122768459 (sec13)
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    122768459 (sec13)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    122768459 (sec13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssen03019]
    122768459 (sec13)
   04131 Membrane trafficking [BR:ssen04131]
    122768459 (sec13)
Messenger RNA biogenesis [BR:ssen03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     122768459 (sec13)
Membrane trafficking [BR:ssen04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    122768459 (sec13)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    122768459 (sec13)
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    122768459 (sec13)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 WD40_Prp19 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR3_2nd WD40_Gbeta EIF3I Beta-prop_EIPR1 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_EML Beta-prop_WDR41 NBCH_WD40
Other DBs
NCBI-GeneID: 122768459
NCBI-ProteinID: XP_043880426
LinkDB
Position
LG4:complement(26579640..26585971)
AA seq 320 aa
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRTVKIFDVRNGGQILVADLRGHEGPV
WQVAWAHPMFGNILASCSYDRKVIIWKEENGTWDKMYEYTGHESSVNSVCWGPYDFGLIL
ACGSSDGAISLLTFTGDQQWDVKKISNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYVK
RFVSGGCDNLVKLWKEEDGQWKEDQKLEAHSDWVRDVGWAPSIGLPTSTIASCSQDGRVF
IWTCDDPAGNTWTAKLLHKFNDVVWHVSWSITGNILAVSGGDNKVTLWKESMDGQWACIS
DVSKGQGAVSTITDTQQNEQ
NT seq 963 nt   +upstreamnt  +downstreamnt
atggtttctgtcatcaacaccgtggacacctcgcacgaggacatgatccacgacgctcag
atggattattacggcactcgacttgccacatgttcgtctgatcgcaccgtgaagatcttt
gatgtcaggaatggaggtcagatactggtcgcagacctgagaggccacgagggtcccgtg
tggcaggtggcgtgggctcacccgatgtttggcaacattctggcttcatgttcctacgat
cgtaaagtcatcatctggaaggaggagaacggaacctgggacaagatgtacgaatacacc
gggcacgagtcatcagtaaactccgtctgctggggcccgtacgactttggtcttatcttg
gcctgtggcagctcagacggagccatttccctgctcacattcactggtgatcagcagtgg
gacgtcaagaagatcagcaacgcacacacgatcggctgtaacgcagtgagctgggctcct
gctgtggttcccggaagcctgatcgatcaaccgtcaggacagaaaccaaactacgtcaag
cgctttgtctccggaggctgcgacaacctggtcaaactctggaaagaggaggacggtcag
tggaaggaggatcagaagctggaggctcacagtgattgggtgagagacgtgggctgggcg
ccatctatcggcctccccaccagcaccattgccagctgctcacaggacggacgcgttttc
atctggacgtgtgacgacccggcgggaaacacctggacggccaaactgctccataagttc
aatgacgtggtttggcacgtgagctggtccatcactggaaacatactggctgtgtcagga
ggagacaacaaggtgacgctgtggaaggagtcgatggacggtcagtgggcgtgtatcagc
gacgtcagcaaaggccagggcgccgtctccaccatcacagacacgcagcagaacgagcag
tga

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