Solea senegalensis (Senegalese sole): 122768459
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Entry
122768459 CDS
T07721
Symbol
sec13
Name
(RefSeq) protein SEC13 homolog
KO
K14004
protein transport protein SEC13
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03013
Nucleocytoplasmic transport
ssen04141
Protein processing in endoplasmic reticulum
ssen04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122768459 (sec13)
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122768459 (sec13)
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
122768459 (sec13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122768459 (sec13)
04131 Membrane trafficking [BR:
ssen04131
]
122768459 (sec13)
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122768459 (sec13)
Membrane trafficking [BR:
ssen04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
122768459 (sec13)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
122768459 (sec13)
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
122768459 (sec13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_Prp19
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_Gbeta
EIF3I
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_WDR41
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
122768459
NCBI-ProteinID:
XP_043880426
LinkDB
All DBs
Position
LG4:complement(26579640..26585971)
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AA seq
320 aa
AA seq
DB search
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRTVKIFDVRNGGQILVADLRGHEGPV
WQVAWAHPMFGNILASCSYDRKVIIWKEENGTWDKMYEYTGHESSVNSVCWGPYDFGLIL
ACGSSDGAISLLTFTGDQQWDVKKISNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYVK
RFVSGGCDNLVKLWKEEDGQWKEDQKLEAHSDWVRDVGWAPSIGLPTSTIASCSQDGRVF
IWTCDDPAGNTWTAKLLHKFNDVVWHVSWSITGNILAVSGGDNKVTLWKESMDGQWACIS
DVSKGQGAVSTITDTQQNEQ
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggtttctgtcatcaacaccgtggacacctcgcacgaggacatgatccacgacgctcag
atggattattacggcactcgacttgccacatgttcgtctgatcgcaccgtgaagatcttt
gatgtcaggaatggaggtcagatactggtcgcagacctgagaggccacgagggtcccgtg
tggcaggtggcgtgggctcacccgatgtttggcaacattctggcttcatgttcctacgat
cgtaaagtcatcatctggaaggaggagaacggaacctgggacaagatgtacgaatacacc
gggcacgagtcatcagtaaactccgtctgctggggcccgtacgactttggtcttatcttg
gcctgtggcagctcagacggagccatttccctgctcacattcactggtgatcagcagtgg
gacgtcaagaagatcagcaacgcacacacgatcggctgtaacgcagtgagctgggctcct
gctgtggttcccggaagcctgatcgatcaaccgtcaggacagaaaccaaactacgtcaag
cgctttgtctccggaggctgcgacaacctggtcaaactctggaaagaggaggacggtcag
tggaaggaggatcagaagctggaggctcacagtgattgggtgagagacgtgggctgggcg
ccatctatcggcctccccaccagcaccattgccagctgctcacaggacggacgcgttttc
atctggacgtgtgacgacccggcgggaaacacctggacggccaaactgctccataagttc
aatgacgtggtttggcacgtgagctggtccatcactggaaacatactggctgtgtcagga
ggagacaacaaggtgacgctgtggaaggagtcgatggacggtcagtgggcgtgtatcagc
gacgtcagcaaaggccagggcgccgtctccaccatcacagacacgcagcagaacgagcag
tga
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integrated database retrieval system