Solea senegalensis (Senegalese sole): 122771158
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Entry
122771158 CDS
T07721
Name
(RefSeq) collectin-12-like
KO
K10062
collectin sub-family member 12
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122771158
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssen04131
]
122771158
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
ssen04091
]
122771158
Membrane trafficking [BR:
ssen04131
]
Endocytosis
Phagocytosis
Opsonins
122771158
Lectins [BR:
ssen04091
]
C-Type lectins
Asialoglycoprotein and DC receptors
122771158
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VHS
COLEC12
Collagen
SH3_1
Lectin_C
SH3_9
SH3_2
Filament
UIM
Alpha-2-MRAP_C
UIM_2
Ly49
DUF3130
Syntaxin
ATG17_like
Motif
Other DBs
NCBI-GeneID:
122771158
NCBI-ProteinID:
XP_043884479
LinkDB
All DBs
Position
LG1:17354611..17403715
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AA seq
1260 aa
AA seq
DB search
MKDDFADEEEVQSFGYKRFGIQEGSECTKCKNDWALRAAIALLYVLCALLTIAVAVLGYK
VVQRMDNVTERMQNYGGKINAVETDLKKLDDQAGEKSVNATSEIKTFKSDLEALQSQLND
IGLRSTKNRDILDDLRITGDDMQNGHVSLQSFLDGNVASLRGLNETLVSYSSVIDDLQTD
TARLQSELQGQVKVQSQTQVSVSALNITQSQQRNLLSTLQKTVEDASQTVQKLKNDYQGL
QQTAWQTRADTEWLKEKVQNLQVLAANNSALARSNGEALDDLGAQLSTLASQIQNTSAIT
EGHDQSMRELMDQQRDHDNTTSSKFDEVEARLDRHENDMDRVTGNVSFATHLLGAISVDL
NGLRSCAETVIQHSDLLLGLNGSVTDARAESKELRVQQDELASRLDREVNNLSMVMEEMK
LVDSKHSQLITNFTILQGPPGPRGLKGDKGPQGPVGQTGRKGDKGDKGILGLVGPKGEQG
AAGLPGMIGPKGGAGPRGIPGSKGSRGSGGRPGNSGEKGDPGAPGLPGRDGPPGVPGPQG
PQGPRGAAGPAGLDGPRGPVGYIGPPGPPGLPGIPALAPPLHIKPPQPTEVPELFPEPAA
EPQGSVSRQVQLPVATTPAPGCPPEFRKFGDSCYYISSASQRLNFDQATQYCANVSSHML
IINDNEEQQFVRNAIGGKGFFWLGLTDREEENVWKWVDGTVPVFKKWKPGQPDNWTHGHE
EGEDCAGKRKQRGKAKSVVVNTPAMPLFTTNPFDQDVEKATSEMNTAEDWGLILDICDKI
GQSRTGPKECLRSIMRRVNHKDPHVAMQALTLLGACVSNCGKIFHLEVCSREFASEVSNV
LNKGHPKVCEKLKALMVEWAEDFRSDPQLSLISAMIKNLREQGVTFPAVGSQAAEQAKAS
PALVAKDPSTSTNKKEEEDLAKAIELSLKEQRQQPQSSLSSLYPNTNQLSSHKSDGRKVR
AIYDFEAAEDNELTFKSGEIITILDDSDPNWWKGETYQGIGLFPSNFVTADLTAEPEMMK
TEKKTVQFSEDVQVETIEPEQEPVYIDEDKMDQLLQMIQSADPTDNQSDSVELLQLEGAC
NQMGPLIDQKLEDIDRKHSELSELNVKVMEALSLYAKLMNEDPVYAMYAKLQSQQYYMQP
PANAAQQVYPAQPASGSYAMSGTAGQGYTIPMEQLPVVSTIPGQHPPSDVHMYMGQPPVY
TAAPGTMAPADIQSYHNPGLAPGTAPTGMTQAPSYSNPTGPSIAPSTDAAQAPYTQKALL
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacgactttgctgatgaagaggaggtgcagtcctttggttacaagaggtttggt
attcaggagggttcggagtgcaccaagtgtaaaaatgactgggcgctgcgagcagctatt
gcactgctctacgtgctctgtgcgctgctcaccatagcagtggctgtccttggatacaaa
gtggtccagagaatggacaatgtcacggagaggatgcagaattatggaggcaagataaat
gcagtggagacagatttaaagaaactagatgaccaagccggagagaagtcagtaaatgct
accagtgaaatcaaaactttcaaatcagatctggaggcattacagagccaactgaatgat
attggactcaggtcgacgaaaaacagggacatcctcgatgaccttcgaatcacaggagat
gacatgcaaaatggccacgtgtccctgcagagctttctggatggaaatgtggcctcactg
cgtggactcaacgaaacgttggtctcctacagcagtgtgattgacgacctccagacagac
actgcgcggctccagtcggagctacagggtcaagttaaagtgcagagtcagacccaggtt
agtgtcagcgcactaaacatcacccagtcccaacaacgcaatctgctcagcacactgcag
aagacggtggaagacgcgagccagacagtgcagaaactgaagaatgattaccagggtctg
cagcagacagcgtggcagacccgggccgacacggagtggttaaaggaaaaggtgcagaat
ctccaagtgttggctgcaaataattctgccctggcccggtccaatggagaagctctggat
gacttaggggctcagctaagtacactagccagccagatccagaacacctcagccatcact
gagggacatgaccagagcatgcgagagctgatggaccagcagcgggaccacgacaacacc
acttcctcgaagttcgatgaggtggaagctcggttagacagacacgagaatgacatggac
cgtgtgacagggaacgtgagcttcgccactcacctcctcggcgccattagcgtcgatctg
aatggacttagatcgtgtgctgagacagtgattcaacattcagacctgttactgggccta
aacggtagcgtgacggacgccagagcagagagcaaagagctgcgagtccagcaggacgag
ctggcgtccaggttggacagagaggtcaacaacctgtccatggtgatggaggagatgaag
ctggtggacagcaagcactctcagctcatcaccaacttcaccatcctgcagggtccaccg
ggtccaaggggcctcaagggagacaagggtcctcaggggccagttggccagacaggacga
aagggtgataaaggagacaaaggaattctaggattggttggacctaaaggagagcaaggt
gctgctggtctaccaggcatgataggtccaaagggtggagctggaccgcgaggtatacca
gggtctaaagggtcaagaggttctggaggtcgacctggaaactctggtgaaaaaggggac
cctggggctccaggacttccaggtagggatggacctccaggggtgccaggaccacagggg
ccacaggggcccagaggagcagctgggcctgcagggttggatgggcctcgtggtcctgtt
ggatatattggccctcctggtcctccaggattaccaggaatccctgcacttgcaccacct
ctacatataaagcctcctcagccaactgaggtccctgaactctttcctgaaccagcagcg
gaaccacaagggtctgtgtcccggcaggtccagctccctgtcgccaccactcctgcacca
ggttgcccacctgagttcaggaagtttggagacagctgctattacatctcctctgcctcc
caacgactcaactttgatcaggccactcagtattgcgctaacgtgtcatctcatatgctc
attatcaatgacaatgaagaacagcaatttgtgagaaatgcaattggaggaaaaggcttc
ttctggctgggcctcactgacagagaggaggaaaatgtctggaagtgggtcgacgggact
gttcctgttttcaagaagtggaagcctggccagcccgataactggacccatggtcacgag
gagggcgaggactgtgccgggaaaagaaaacaacgtgggaaggcaaaatctgttgtcgtc
aataccccagcaatgcctctcttcacgaccaacccatttgaccaagatgttgagaaagca
accagtgagatgaacacagctgaggactggggcctcattctggacatttgtgataagatt
ggccagtcacgcactgggcctaaagaatgtctccgctctattatgagaagagtgaaccat
aaggatcctcatgttgccatgcaggcacttactcttctaggtgcttgcgtgtcaaactgt
gggaagatatttcacttggaggtctgctcgagagagtttgccagtgaagtcagtaatgtc
ttaaataagggtcatcccaaggtgtgtgagaaactgaaggccctaatggtggagtgggca
gaggactttcgcagtgatccacaactcagtctgatctcagcaatgattaagaatctacgt
gaacagggtgttactttcccagcagttgggtcccaggctgcagaacaagcaaaagcaagc
cccgctttagtggcaaaggatccgtccacttcaacaaataaaaaagaggaggaagatttg
gccaaagctattgagctttcactgaaggagcaacgtcagcagccgcagtcatctctgtca
agcctttacccaaacaccaaccagctatcctcacacaaatcagatggcagaaaagtccgc
gccatctatgactttgaggctgctgaggacaacgagctcaccttcaagtcgggagaaatc
atcaccatcctggacgatagtgacccaaactggtggaaaggggagacgtaccagggaatt
gggctgtttccctctaactttgtcactgctgacctcactgccgagcctgagatgatgaag
acggagaagaagacggtacagttcagtgaggatgtacaggtggagaccatagaacccgaa
caagagcctgtatatatagacgaggacaaaatggaccagctcctgcagatgatccagagt
gcagatcccacagacaaccagtcagacagtgttgagttactacagcttgaaggtgcttgc
aatcaaatggggcccctcattgaccagaagttggaagatattgacaggaaacactcggag
ctgtcagagctgaacgtcaaggtgatggaagctctgtctttgtacgccaagttgatgaat
gaggatccagtctacgccatgtatgccaagctgcagagccaacagtactacatgcagccg
cctgctaatgcagcacaacaggtctaccctgctcagcctgcatcaggttcatatgcaatg
agcggtactgcagggcagggttacactattcccatggagcagcttcctgttgtaagcacc
atacctggtcagcatcctcccagtgacgttcatatgtacatgggccagccaccggtctac
actgcagcaccaggcaccatggccccagcagacattcagtcctaccacaatcctggtctc
gccccaggcacggctcccacaggcatgacgcaggcgccgagctacagcaaccccactggc
ccgagcatagcaccttccacagatgccgcacaggccccctacacacagaaagccctgcta
tag
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integrated database retrieval system
