Solea senegalensis (Senegalese sole): 122776410
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Entry
122776410 CDS
T07721
Name
(RefSeq) polyubiquitin-like
KO
K08770
ubiquitin C
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03320
PPAR signaling pathway
ssen04120
Ubiquitin mediated proteolysis
ssen04137
Mitophagy - animal
ssen04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122776410
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122776410
04137 Mitophagy - animal
122776410
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
122776410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssen04121
]
122776410
Ubiquitin system [BR:
ssen04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
122776410
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
TBK1_ULD
Dsc3_N
Rad60-SLD_2
DUF2604
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
122776410
NCBI-ProteinID:
XP_043892911
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Position
LG1:complement(27940762..27942504)
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AA seq
517 aa
AA seq
DB search
MQIFVKTLTGKTITLEVETSDTIENVKAKIQDKEGIPPDQQRIIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQVFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQVFVKTLTGKTITLEVESSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRSLSDYNIQKESTLHLVLRLRGGMQVFVKTLTGKT
ITLEVESSDTTENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRSLSDYNIQKESTLHLVLR
LRGGMQVFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRSL
SDYNIQKESTLHLVLRLRGGMQVFVKTLTRPLLSDTIVKAKIQDKEGIPPDQQRLIFAGK
QLEDGRTLSDYNIQKESTLHLVLRLRGGMQVFVKTLTGKTITLEVESSDTIENIKAKIQD
KEGIPPDQQRLIFAYKQLEDGHTFSDYNNQKEFILHL
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtaaaaactctgaccggtaaaaccattaccctggaggtggagaccagt
gacacaattgaaaatgttaaggccaaaatccaggataaggagggcattcctccagaccaa
cagcgtataatctttgcaggcaagcagttggaagatgggcgcaccctctccgactataac
atccagaaggagtcaacccttcatcttgtgctacgcctaagaggaggaatgcaggtattt
gtaaagaccctgactggcaagaccattacccttgaggtggagtccagtgacaccattgaa
aatgtcaaggccaaaatccaggataaggagggcatccctccagaccagcagcgtcttatc
tttgctggcaagcagttggaagatgggcgcaccctctccgactacaacatccagaaggaa
tcaacccttcatcttgtgctacgcctaagaggaggaatgcaggtatttgtaaagaccctg
accggcaagaccattactctggaggtggagtccagtgacaccattgaaaacgtcaaggcc
aaaatccaggataaggagggcatccctccagaccagcagcgactaatctttgctggcaag
cagttggaagatggccgctccctctccgactacaacattcagaaggaatcaacccttcat
cttgtgctacgcctaagaggaggaatgcaggtatttgtaaagaccctgactggcaagacc
attacccttgaggtggagtccagtgacaccactgaaaatgtcaaggccaaaatccaggat
aaggagggcatccctccagaccagcagcgtcttatctttgctggcaagcagttggaagat
ggacgctccctctccgactacaacatccagaaggaatcaactcttcatcttgtgctacgc
ctaagaggaggaatgcaggtatttgtaaagaccctgaccggcaagaccattaccctggag
gtggagtccagtgacaccattgaaaacgtcaaggccaaaatccaggataaggagggcatc
cctccagaccagcagcgtctaatctttgctggcaagcagttggaagatggccgctccctc
tccgactataacatccagaaggagtcaacccttcatcttgtgctacgcctaagaggagga
atgcaggtatttgtaaagaccctgacaagaccattattgagtgacaccattgtcaaggcc
aaaatccaggataaggagggcatccctccagaccagcagcgactaatctttgctggcaag
cagttggaagatgggcgcaccctctccgactataacatccaaaaggagtcaaccctccat
cttgtgctacgcctgagaggaggaatgcaggtatttgtaaagaccctgaccggcaagacc
attaccctggaggtggagtccagtgacaccattgaaaacatcaaggccaaaatccaggat
aaggagggcatccctccagaccagcagcgactaatctttgcttacaagcagctggaagat
ggccacaccttttccgactacaacaaccagaaggagttcatcctccatctttag
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integrated database retrieval system