Solea senegalensis (Senegalese sole): 122777008
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Entry
122777008 CDS
T07721
Symbol
ccdc187
Name
(RefSeq) coiled-coil domain-containing protein 187 isoform X1
KO
K25949
coiled-coil domain-containing protein 50
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssen04131
]
122777008 (ccdc187)
Membrane trafficking [BR:
ssen04131
]
Autophagy
Other autophagy associated proteins
Others
122777008 (ccdc187)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC50_N
ArnB_C
Motif
Other DBs
NCBI-GeneID:
122777008
NCBI-ProteinID:
XP_043893823
LinkDB
All DBs
Position
LG11:complement(5966773..5984425)
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AA seq
857 aa
AA seq
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MSLDDISNASRCRTYGHHCTVDCELSASVFAMNLTASRLFPIIRDTTHSASPAMCQCFAV
LEDGVLAHNLQEQEIEQHYTSNVQKNQLVQNDIRVAKRLQDEEEEQWAQQTAVVRQTSRQ
LEEQDLEFARVIQDEIQRCAEEARRREMDDEEIAKRLQEEEEQRINGRSRGQKGDSSEGS
GDDSALPPPQQHTLRSLQEGEQGSTFTTRWQSSTSQNHSDSNGTSADSHRGQVAHRSTAS
WSNQGHAHSIRQIRHEFREPLSEDSEDSDTVFSEQLSVWSQRWNRRVNTAPPQRQASLHH
SQGRSYRSLCSRNSLPNAFRSWRDESGECEEDYCDSDHYAREIRRLANHNQERSAREGCD
GWNRSRDQDRDSRLVKGRERQCSRSESVRIHDRVRHKNRDLVRTCSYKDNPDKRVHFQDE
TRRSNRHSDESKQVWEMLGQILEERGVPVTFGGDGAPLQIRSQRRDSQSLHGSEVSYSNS
QPHQRAFQRAATTRHSFHGDIRKRRESSYRENSGRDHREGRDRHCDNVERDGEVYEISSR
GSSVVNRERQGSRRWRNDGCTNGDEGERNAHHHRVKGTTSERGHWHKPIEQRLSSVEAQN
VERRVEWPPRRAPQRSQSLSSNRSSTRGRPRHMSAGVSLQLDPGEASLDLGELQQVLQDE
ELARKLQEEEEKLLRRNSQPSPRSSYPEGDFRVAQVAQDEEIAHFMQKQEIKSKRRSREL
EGPSSWREHRAMVTHHDSQAARERQVQRERLDSEGLPSHTEDCSPENQPPSPTSTLPQDE
HVRNIAEELDPTFQSRRQDTERLQLEQTGLACQSPPMPRSGSNDIVVEPAFIPPTKRQTE
KPASTKPKGKRENCKQQ
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgagtctggacgatatttcgaatgcttcacgttgtcgcacatatggtcaccactgtact
gtcgactgtgaacttagtgcttccgtttttgcaatgaatctcacggcttcccgtttattt
cccatcatccgtgacaccacccacagtgcatctccagccatgtgccagtgtttcgcagtt
ctggaggatggagtgttggcacacaacctgcaggagcaggagattgagcaacactacacc
agcaacgtccagaagaaccagctggtacagaatgacatccgtgtggctaagaggctgcag
gatgaggaggaggagcagtgggcacaacaaactgccgtcgtccgacagacttccagacag
ctagaggagcaagacttggagtttgctcgcgtcattcaggatgagatccagcgttgtgct
gaggaggcccgcagacgagagatggatgatgaggaaatagctaaacgattgcaggaggag
gaggagcagaggatcaatgggaggagcagagggcagaagggggacagtagtgaaggcagc
ggcgacgattcagctctgccgcctccccaacaacacacactccgcagccttcaagaaggg
gagcagggctcaaccttcaccactaggtggcaatcttctacctctcagaaccattcagac
tcaaatgggacttctgctgactcccacaggggacaagtagctcatagaagcacagcttca
tggtcaaaccaaggacatgcacattccattaggcaaatcaggcatgagtttagagaacct
ttgagtgaggattcagaggactcggacacagttttctctgaacagctctctgtctggtcc
cagagatggaatagaagagtcaacacagcgcctcctcagcggcaggcctctttacatcat
tcccaggggagaagctacagaagtctgtgctctcgcaacagcttaccaaatgcattcagg
agctggagggacgagagcggagaatgtgaggaggactattgtgacagtgaccattatgcc
agagagataaggcggcttgcgaatcacaatcaggagaggagcgccagagaaggatgtgat
ggttggaacaggagtagagatcaggatagagactctcggttggtcaagggaagagaaagg
caatgtagtcgcagcgagtctgtcaggatacatgatcgagttagacacaaaaacagagac
ttggtaagaacctgtagctataaggacaatcctgacaaacgtgtccactttcaggacgag
accaggcgctctaacaggcactcagatgaaagcaagcaagtgtgggagatgctaggccaa
atcctggaggagaggggtgtgcctgtgacgtttggcggcgatggggcgcccctccaaata
agatctcaaaggagagacagccagtcgcttcatgggagtgaagtctcctacagcaactcc
caaccacatcagagagccttccagagagctgccaccaccaggcacagtttccatggagat
atcaggaagaggagggaatcatcataccgagagaacagtgggagagatcacagagaaggc
agagacaggcactgtgataatgtggagcgtgatggagaggtttatgagattagtagcaga
ggctcctcagtcgtaaacagagaaaggcagggcagtcgaaggtggagaaatgacggatgc
acgaatggcgacgagggggagcggaatgcacatcatcacagagtcaagggcacaacaagt
gaacgcgggcattggcacaagcccatagaacaaaggttaagctcagtggaggcacagaat
gtggagaggagagtggagtggcctcctcgaagagccccgcagcgtagccaaagtctcagt
agcaacaggtcttcaaccagaggtagaccaagacacatgtcagcaggagtatcattgcaa
ctagacccgggtgaggccagtctggaccttggggagttgcagcaggtcctacaagatgaa
gaactcgcccgcaagctgcaggaagaagaggagaaactgttgagaagaaactcccaacca
tctccacgcagttcttacccagagggagatttcagagtagcacaagtggcgcaggatgag
gaaattgcacattttatgcagaagcaggaaattaagtcaaagcggagatctcgcgagctg
gaagggccgtcgtcatggcgcgagcacagagcaatggtcactcatcatgacagtcaagct
gcaagagagagacaggttcaacgagagaggctcgactcggagggtcttccttcacacact
gaagactgcagcccagagaaccagccgcccagtcccacctctactttaccacaagacgag
cacgtcaggaacattgcagaggagctggacccgaccttccagtccaggagacaagacaca
gagcgcctccaactggaacaaaccggtctagcctgtcagtcgcctccaatgccacgttcc
ggttcaaatgacattgttgtagagcctgctttcatccccccaacaaagcggcaaacggag
aaaccggcaagcactaaaccaaaagggaagcgggaaaattgcaagcagcagtga
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