Solea senegalensis (Senegalese sole): 122777884
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Entry
122777884 CDS
T07721
Symbol
xpc
Name
(RefSeq) DNA repair protein complementing XP-C cells
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
122777884 (xpc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssen03400
]
122777884 (xpc)
DNA repair and recombination proteins [BR:
ssen03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
122777884 (xpc)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
122777884
NCBI-ProteinID:
XP_043895348
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Position
LG11:17397730..17407772
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AA seq
920 aa
AA seq
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MAKRRECAQKEVDSKKSRQLLNAKSNAAKTARAKKRVTDTGIIEKEEKLKRKIKPKSRLS
SKLLVKCNSSPKSTAVNTSKYFKSPVKDKKVDSDDDFNMVTSLTPVVTVNARKPEKEEEV
DDSEDDEDDWEEVEELDEPLGPVDSSEPALLAQPVEIEIETPEVRKKQKKQAEFETYLRR
MMNKYQKDVLIDTHKVHLMCLIASGMFCNRLCSEPDLLAITLSLLPTHFGMVAKERIDQN
YLSGLLKWFRATFTLNPSLPCEERPDTRVLLERRLASLSARNHQEMTHLFLLVLRSLQLF
CRLVLSLQPVSFKFPSAKGKANRTSNGAAGKSHIIPETSKITSPSPKVSPGTKRPATGAG
PKEDRGGKKAKIKKMEEEEKAVTSGGQRPKNSKRRSVASKVSYKEESNSEREEELSDEEE
FQATSGEESEDSESEAKPAKKGKGSRKAKVTNNKKTAAPERKRDGGKKQVKDEEWEEGDD
DFIEVEGPKNNTTKRRSGKKTEPGADEWLEVYLEKTSSWVCVDVEHGVGMPHLCSKNATV
PVTYVVSVDDDGFVKDLGRKYDPTWMTLSRKRRVDEEWWEATLAPFQGPEDERDMKEEKE
LQNKLQNKPLPISVSEYKNHPMYALKRHLLKYEAIYPPTSTVLGYCRGEPVYSRDCVHTL
HSRDTWLKEARTVRLGEEPYKMVRGFSNRSRKARVMSELKEENDLALFGDWQTEEYQPPI
AVDGKVPRNDYGNVYLFKPCMLPVGCVHLRLSNLHRVARKLDIDAAPAVTGFDFHGGYSH
AVTDGYIVCEEHEEILRAAWQEDQEHQKQKEKEKREKRVISNWTLLVKGLLIRERLKKRY
GKKNPGLGSLPHEDNAGGFSSDEEVVEEESHAAKTASETLAMSWPQNRQAEEDGGNSSGL
KTKRERRGQEKHMFPFEKVE
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagagaagagagtgcgcacagaaagaggtcgactcaaagaaatcgcgacagtta
ctgaatgcgaagagcaacgctgctaaaacagcgagagctaagaaaagagtcacagacact
ggcatcatagaaaaagaggagaagcttaagagaaagatcaaacccaagtcacgtttgtcc
tcaaaactactggtgaagtgcaactcttctcctaaatccactgctgtcaacaccagtaaa
tacttcaaatcaccagtgaaggacaagaaggttgatagcgatgatgactttaacatggtg
acctcactgacacctgtggtaacagttaatgccaggaaaccagagaaagaagaggaggtg
gatgacagtgaagatgatgaggatgattgggaggaagtggaagaactagatgaaccactg
ggtccagttgactcgtcagaacccgccctgcttgctcagccagtagaaatagagattgag
actccagaagtcaggaaaaagcagaagaagcaggcggagtttgagacatatctgaggcgg
atgatgaacaaataccaaaaagacgtgctgatagacacacataaggttcacctcatgtgc
ttgattgccagtgggatgttttgtaatcgtctgtgcagtgaaccagatctgctggccatc
actctgtcattgctgcccacccactttggcatggttgctaaggaacgcattgaccagaac
tacctctctggattgctcaaatggtttagagcaacattcaccctcaatcccagtcttcct
tgcgaggagcgtccagacacccgggttcttcttgagaggcggctggccagcctctcagca
aggaaccaccaggagatgactcatctgttcctgttggtcctgaggtctctgcagctcttc
tgcagattggttctttctctgcagccagtatctttcaaattcccatcagccaagggtaaa
gcaaacagaacctcgaatggtgccgcagggaaaagccacataatcccagaaacctccaag
atcacctctcctagtccaaaggtctctcctggcaccaagagaccagccacaggggcggga
cccaaggaagacagaggaggaaaaaaagccaaaataaaaaaaatggaggaggaggagaag
gctgtaacatcaggaggacagagaccaaagaactcaaagcgccgaagtgttgcgtcaaag
gttagctacaaggaggagagcaacagtgagagagaagaggagcttagtgatgaggaagaa
tttcaggcaacgagtggtgaggagagtgaggattcagagagtgaggctaaacctgcaaag
aagggaaaagggagcagaaaagctaaagtgacaaacaacaagaagactgctgctccagaa
agaaagagagatggagggaaaaaacaggtaaaagatgaagagtgggaggaaggggatgat
gattttatagaagtagaaggaccaaaaaataacacaacgaagcgcaggagtgggaagaag
acagagccaggagcagacgagtggttggaggtgtacctggaaaaaacctcctcttgggta
tgcgtggatgttgagcacggtgttgggatgcctcacctatgttccaagaatgcaaccgtt
ccagtgacgtatgtggtgtcggtggatgacgacgggtttgtgaaggatttgggaaggaag
tatgaccccacctggatgacattgtcaaggaagaggcgggtggatgaagagtggtgggaa
gcaacgcttgcaccattccagggaccagaggatgagagagacatgaaggaggagaaggag
ctccagaataaacttcagaacaaacccctgcccatctctgtaagtgagtacaagaaccac
ccaatgtacgcattaaagagacacctgctgaagtatgaagccatctacccaccaacatcc
accgtactgggatactgcagaggagagccagtatactccagggattgtgtgcacacactc
cactccagagacacatggctaaaagaagctcgtactgtcagactgggagaggagccatac
aaaatggtgaggggcttctctaatcgatcacggaaggccagggtcatgtcggagctgaag
gaagaaaatgacctggcactgtttggagattggcagactgaagagtaccaaccacctata
gctgtggatgggaaggttccccgtaacgactacggtaacgtttacctgtttaagccctgt
atgttgccagtgggctgtgttcacctcagattgtccaacctgcaccgtgtggccaggaag
ctggacattgatgctgctcctgcagtcacaggatttgacttccatgggggatactcgcat
gctgtgactgatggatacatcgtgtgtgaggagcatgaggagattctcagagctgcctgg
caggaagaccaagagcatcagaagcagaaagagaaagagaaaagagaaaaaagagtgatc
tccaactggactctgctggtgaaaggactcctgatcagagaaaggctcaagaagcgctac
ggcaagaagaaccctggactggggagccttccacatgaagacaatgctggtggcttttct
tctgatgaggaggtggttgaagaggagagtcatgctgctaagactgcatctgagactttg
gccatgtcctggccccaaaacagacaagcagaggaggacggagggaactccagtggactg
aagacaaaacgagaaaggagaggacaagagaaacacatgtttccttttgagaaagtagaa
tga
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