Solea senegalensis (Senegalese sole): 122778424
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Entry
122778424 CDS
T07721
Symbol
csf1ra
Name
(RefSeq) macrophage colony-stimulating factor 1 receptor
KO
K05090
macrophage colony-stimulating factor 1 receptor [EC:
2.7.10.1
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04010
MAPK signaling pathway
ssen04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
122778424 (csf1ra)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
122778424 (csf1ra)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ssen01001
]
122778424 (csf1ra)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ssen04090
]
122778424 (csf1ra)
Enzymes [BR:
ssen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
122778424 (csf1ra)
Protein kinases [BR:
ssen01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
122778424 (csf1ra)
CD molecules [BR:
ssen04090
]
Proteins
122778424 (csf1ra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
C2-set_2
VEGFR-1-like_Ig-like
Motif
Other DBs
NCBI-GeneID:
122778424
NCBI-ProteinID:
XP_043896251
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All DBs
Position
LG12:complement(11438714..11448843)
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AA seq
980 aa
AA seq
DB search
MLSYLTLLLGIVASAASEWRRPVIRFNSKVVRSSEVVVTPGNPLDLRCEGDSHVNWQTRL
PKQRHYVLKGKGNVRTLKVEHPSAEFTGTYRCYYTAGPQYRYLTSSVHVYVQDPDPSRAF
WTSSTSLRVVKKEGEDYLLPCLITNPAATDLGLRMDNGTSVPPEMNITVDRHRGILIHNL
HPSFNADYVCTARVNGLEKTSKAFSINVIQRLRFPPYVFLEMDEYVRIVGEKLAIRCATH
NPNFNYNVTWKYTTKSKPIVEERARSSGENRLDIKSTLIISAVDLADTGNITCIGTNEAG
ENSSTTYLLVVDKPYIRLLPQLSPKLAHKGLLVEVNEGEDLELSVVIEAYPHITEHRWHT
PTSPSTSTQEHKLIRYNNRYHATLQLRRMNAQEQGQYTFYARSDLTNASITFQVQMYQRP
VAVVRWENVTTLTCTSFGYPAPRIIWYQCLGIRPTCNENNSGLQMAIPLQASTVEVQREE
NGAVEVESVLTVGLSSQRMTVECVAFNLVGVSRDTFAVEVSDKLFTSTLTGAAGILSILL
VLLVFLFYKYKQKPRYEIRWKIIEARDGNNYTFIDPTQLPYNEKWEFPRDKLKLGMTLGA
GAFGKVVEATAYGLGKEDNVTRVAVKMLKASAHTDEKEALMSELKILSHLGHHKNIVNLL
GACTYGGPVLVITEYCSLGDLLNFLRQKAETFVNFVMSIPDAMESSNDYKNICNQKQFIR
SDSGISSESSSSYMEMRPSQPANVESTQDAACVETGDWPLDIDDLLRFSFQVAQGLDFLA
GKNCIHRDVAARNVLLTNHREAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFEC
VYTVQSDVWSYGILLWEIFSLGKSPYPRMAVDSRFYKMVKRGYTMSQPDFAPPEIYTIMK
MCWHLEPTERPTFSKISQMIERLLGDQPEQEQLTYQNVQQEVTEGEVCDESKCCNGPCDQ
SCDHEEEEQPLMRTNNYQFC
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcctacctcactctgttgctggggatagtggcctctgctgcttcagaatggagg
cgcccggtcatacgcttcaattctaaggtggtgaggagttctgaggtcgtggtcacacct
gggaacccactggatttaaggtgtgagggtgacagccacgtcaactggcaaaccagacta
cccaaacaacggcactatgtgctcaagggaaaagggaatgtccgcaccttaaaggtggag
catccctctgcagaatttaccggaacatacaggtgttattacactgcagggcctcagtat
cgttatctgacctcctcagtgcatgtgtatgtacaagatccagatccaagccgtgcgttc
tggaccagcagcacgtccctgcgtgtggtgaagaaagagggtgaggactatctcctgccc
tgcctgatcaccaacccagcagccacagacctgggcctccgcatggacaacgggaccagt
gtgccgccagagatgaacattacagttgaccgacatcggggcattctcatccacaacctc
catcccagctttaacgctgactacgtctgcacggccagggtcaacggactggagaagacc
tccaaggccttctccatcaacgtcattcagaggcttcgttttcctccgtatgttttcttg
gagatggatgaatatgtgcgcatcgttggcgagaaactcgcgattcgctgcgccacacac
aaccccaacttcaactacaatgtcacctggaaatacaccaccaagtcgaaaccaatcgtt
gaggagagggctcgctccagtggagaaaaccgcctggacataaagagcacactgatcatc
tctgctgtggaccttgcagatacaggaaatatcacctgtattggcacgaatgaggcagga
gagaacagttcaaccacatacttgctggttgtagataagccctatatcaggctgttgccc
cagttgtcccccaaactggcccacaagggtctgttggtcgaggtgaacgagggagaagat
ctggaactcagcgtggtcatcgaagcgtaccctcacatcacagagcacaggtggcacacg
ccgacttctcccagcacgtccacccaggagcacaagctgatccgatacaacaacagatac
catgcaactctgcagctgaggagaatgaatgcacaggagcagggccagtacaccttttat
gccaggagtgacctgaccaacgcttccatcacgttccaagtccaaatgtatcagaggcct
gttgctgtggtgaggtgggaaaatgtaaccacactcacctgcacgtcattcggttatcct
gctcccagaatcatctggtaccaatgtctcgggatacggcctacgtgcaatgagaacaac
tcagggctacagatggccatccctctccaggcctccacagtggaggtacagagggaggag
aacggggccgtggaggtggagagcgtcctcaccgtgggtctgtccagtcagaggatgaca
gtggagtgtgtcgccttcaacctcgttggtgtcagcagggacacattcgccgtggaggtc
tctgataaactcttcacttccactctgactggagcagcagggattctgtccatcctcctt
gtgcttctggtttttctgttttacaaatataagcagaaacccaggtatgagatccgttgg
aagatcattgaggcgagagacggaaacaactacaccttcattgaccccactcagctgccc
tacaatgagaagtgggagttcccaagagacaaactgaaactagggatgactctgggagca
ggagcttttgggaaggttgtcgaggccacagcctatggtctgggaaaggaagacaatgtg
actcgtgtggctgtgaagatgctgaaagccagtgcccacacagatgagaaggaggctctg
atgtctgagctgaagatcctcagccacctgggacaccacaagaacattgtcaatctactg
ggagcctgcacctatggaggaccagtgcttgtgatcacggagtactgcagcctcggcgac
ctcctgaacttcctccgccagaaggcagagacgtttgtgaactttgttatgagcattcct
gacgccatggagagctcaaatgactacaagaacatctgcaatcagaaacagttcatcaga
agtgacagtgggatctccagtgaatcatccagcagttacatggagatgaggcccagtcag
cctgcaaatgtagaatcaacccaagatgctgcctgtgtggagactggtgactggccactg
gacatcgacgacttgctgaggttttcctttcaagtggctcagggccttgactttttagcc
ggcaaaaattgtattcacagagatgtggctgccagaaatgtccttttgaccaaccacaga
gaggccaagatttgtgactttgggctggcacgtgacatcatgaatgactccaactacgtg
gtgaagggcaatgcacgtctgccagtcaagtggatggctccagagagcattttcgagtgt
gtgtacaccgtccagagtgatgtctggtcctatggcatcctcctgtgggagatcttctct
ttaggtaagagtccttaccctcgcatggctgtggactccaggttctacaagatggtgaag
cgtggctacacgatgtcccaaccagactttgccccgcctgaaatctacacgatcatgaag
atgtgctggcatctggagcccacggagcgtccaacattcagcaagatcagtcagatgata
gagagactactcggggaccaacctgagcaggaacagctaacctaccagaatgttcagcag
gaggtcacagagggtgaagtgtgtgatgagtccaagtgctgcaacggcccctgtgaccag
tcttgtgaccacgaggaagaggagcagcctctgatgaggaccaacaactaccagttttgt
taa
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