Solea senegalensis (Senegalese sole): 122779789
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Entry
122779789 CDS
T07721
Name
(RefSeq) polyubiquitin isoform X1
KO
K08770
ubiquitin C
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03320
PPAR signaling pathway
ssen04120
Ubiquitin mediated proteolysis
ssen04137
Mitophagy - animal
ssen04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122779789
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122779789
04137 Mitophagy - animal
122779789
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
122779789
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssen04121
]
122779789
Ubiquitin system [BR:
ssen04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
122779789
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Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
TBK1_ULD
Rad60-SLD_2
Dsc3_N
DUF2604
OTU1_UBXL
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
122779789
NCBI-ProteinID:
XP_043898332
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Position
LG13:20045543..20046952
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AA seq
375 aa
AA seq
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MQIFVKTLTGKSVTLEVEPTDTTENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTVENIKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTVENIKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVESSDTIENIKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGNWKMAAPCP
TTTSRKSQPSILCSA
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaaaaccctgactggcaaatcagttacccttgaggtggagcccacc
gacaccactgagaatgtcaaggccaaaatccaggataaggaaggcatccctccagaccag
cagcgtctcatatttgccggcaagcaactggaagatggtcgcaccctttccgactacaat
atccagaaggagtcaaccctccatcttgtgctccgcttaagaggaggaatgcagatcttt
gtgaagaccctcactggcaagaccatcaccctggaggtggagtccagtgacaccgttgaa
aacatcaaggccaaaatccaggataaggaaggcatccctccagaccagcagcgtctcatc
tttgccggcaagcaactagaagatggtcgcaccctgtccgactacaacatccagaaggag
tcaaccctccatcttgtgcttcgcttaagaggaggaatgcagatctttgtgaagaccctc
actggcaagaccatcaccctggaggtggagtccagtgacaccgttgaaaacatcaaggcc
aaaatccaagataaggaaggcatccctccagaccaacagcgactcatctttgctggaaag
caactagaagatggtcgcaccctgtccgactacaacatccagaaggagtcaacgctccat
cttgtgctgcgcttaagaggaggaatgcagatctttgtgaagaccctgactggaaagact
atcacattggaggtggagtccagtgacaccattgaaaacatcaaggccaaaatccaagat
aaggaaggcatccctccagaccagcagcggctcatctttgccggcaagcaactagaagat
ggtcgcaccctgtccgactacaacatccagaaggagtcaaccctccatcttgtgctccga
ttaagaggaggaatgcagatctttgtgaagaccctgactggaaagactatcactctggag
gtagagcccagtgacaccattgacaacgtgaaagccaaaatccaggataaagaaggcatc
cctccagaccagcaacgactcatctttgctggcaattggaagatggccgcaccctgtccg
actacaacatccagaaagagtcaaccctccatcttgtgctccgcttaa
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