KEGG   Solea senegalensis (Senegalese sole): 122779789
Entry
122779789         CDS       T07721                                 
Name
(RefSeq) polyubiquitin isoform X1
  KO
K08770  ubiquitin C
Organism
ssen  Solea senegalensis (Senegalese sole)
Pathway
ssen03320  PPAR signaling pathway
ssen04120  Ubiquitin mediated proteolysis
ssen04137  Mitophagy - animal
ssen04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:ssen00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    122779789
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    122779789
   04137 Mitophagy - animal
    122779789
 09150 Organismal Systems
  09152 Endocrine system
   03320 PPAR signaling pathway
    122779789
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ssen04121]
    122779789
Ubiquitin system [BR:ssen04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   122779789
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 TBK1_ULD Rad60-SLD_2 Dsc3_N DUF2604 OTU1_UBXL Ubiquitin_5
Other DBs
NCBI-GeneID: 122779789
NCBI-ProteinID: XP_043898332
LinkDB
Position
LG13:20045543..20046952
AA seq 375 aa
MQIFVKTLTGKSVTLEVEPTDTTENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTVENIKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTVENIKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVESSDTIENIKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGNWKMAAPCP
TTTSRKSQPSILCSA
NT seq 1128 nt   +upstreamnt  +downstreamnt
atgcagatctttgtgaaaaccctgactggcaaatcagttacccttgaggtggagcccacc
gacaccactgagaatgtcaaggccaaaatccaggataaggaaggcatccctccagaccag
cagcgtctcatatttgccggcaagcaactggaagatggtcgcaccctttccgactacaat
atccagaaggagtcaaccctccatcttgtgctccgcttaagaggaggaatgcagatcttt
gtgaagaccctcactggcaagaccatcaccctggaggtggagtccagtgacaccgttgaa
aacatcaaggccaaaatccaggataaggaaggcatccctccagaccagcagcgtctcatc
tttgccggcaagcaactagaagatggtcgcaccctgtccgactacaacatccagaaggag
tcaaccctccatcttgtgcttcgcttaagaggaggaatgcagatctttgtgaagaccctc
actggcaagaccatcaccctggaggtggagtccagtgacaccgttgaaaacatcaaggcc
aaaatccaagataaggaaggcatccctccagaccaacagcgactcatctttgctggaaag
caactagaagatggtcgcaccctgtccgactacaacatccagaaggagtcaacgctccat
cttgtgctgcgcttaagaggaggaatgcagatctttgtgaagaccctgactggaaagact
atcacattggaggtggagtccagtgacaccattgaaaacatcaaggccaaaatccaagat
aaggaaggcatccctccagaccagcagcggctcatctttgccggcaagcaactagaagat
ggtcgcaccctgtccgactacaacatccagaaggagtcaaccctccatcttgtgctccga
ttaagaggaggaatgcagatctttgtgaagaccctgactggaaagactatcactctggag
gtagagcccagtgacaccattgacaacgtgaaagccaaaatccaggataaagaaggcatc
cctccagaccagcaacgactcatctttgctggcaattggaagatggccgcaccctgtccg
actacaacatccagaaagagtcaaccctccatcttgtgctccgcttaa

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