Solea senegalensis (Senegalese sole): 122781449
Help
Entry
122781449 CDS
T07721
Name
(RefSeq) calpain-1 catalytic subunit-like isoform X1
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04141
Protein processing in endoplasmic reticulum
ssen04210
Apoptosis
ssen04217
Necroptosis
ssen04218
Cellular senescence
ssen04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122781449
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
122781449
04217 Necroptosis
122781449
04218 Cellular senescence
122781449
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
122781449
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ssen01002
]
122781449
Enzymes [BR:
ssen01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
122781449
Peptidases and inhibitors [BR:
ssen01002
]
Cysteine peptidases
Family C2: calpain family
122781449
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_7
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
122781449
NCBI-ProteinID:
XP_043901033
LinkDB
All DBs
Position
LG15:9361248..9373249
Genome browser
AA seq
704 aa
AA seq
DB search
MDPAGGISATIYTSRLRAEGMGSNEQAVHFANQDYEALKQECVESGSLFEDPCFPAEPPS
LGFKELAPHSSKTRDVEWIRPTELTQDPQFIVGGATRTDICQGALGDCWLLAAIASLTLN
EKLLHRVVPHGQTFQDDYAGIFHFQFWQFGEWVDVVIDDRLPVKDGELMFVHSAEGNEFW
SALMEKAYAKLNGSYEALSGGSTTEGFEDFTGGVSEMYELRKAPRDLYRIIGKALERGSL
LGCSIDITSAFDMEAVTFKKLVKGHAYSVTGLKEVDFQGDMTRLIRVRNPWGQVEWTGAW
SDNSSEWDEIDPSEREDLHLQMEDGEFWMSFSEFLRQFSRLEICNLTADALSEDAVSHWN
TMKFYGTWRRGSTAGGCRNHPNTFWINPQYKITLLEEDDDPEDDEVACSFLVSLMQKDRR
RYRRQGQDMHTIGFALYEVPEEYRGCHNVHLKKDFFLRHSSCARSETFINMREVSTRLRL
PPGEYIVVPSTFEPSKEADFVLRVFTEKQSETEELDDEISADLGDDDEITEDDIDDSFKS
MFAQLAGEDMEISIRELRTILNRVVSRHKDLKTDGFSMESCRTMVNLMDKDGSARLGLVE
FQILWNKIRKWLGIFRQYDLDKSGAMSSYEMRLAVEAAGFKLNNRLNQLLVARYAENEMI
DFDNFICCLVKLEAMFRSYRQFDKEGSGVAEMNVTEWLYMTMCG
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggatccagccggagggatatctgcaacaatatacaccagtaggctccgagccgaaggc
atgggctccaacgagcaggctgtgcacttcgccaaccaggactatgaggcactgaaacaa
gagtgtgtggagtcgggctccctgtttgaagacccctgtttcccagctgagcctccatcc
ctgggctttaaggagcttgcgcctcattcctctaaaactagagatgtggagtggataagg
cccacggaactgacacaggaccctcagttcattgtgggcggtgccaccagaacagacatc
tgtcagggagcccttggtgattgttggctcttggcggccatcgcctcactcactctaaat
gagaagcttcttcatcgtgttgtcccacatgggcagaccttccaagatgactatgctgga
attttccactttcagttttggcagtttggcgaatgggtggatgttgtgattgatgaccgg
ctgcctgtcaaagatggggagctcatgtttgtccattcggctgagggcaatgaattctgg
agtgcactcatggagaaggcttatgcaaaactaaatggatcctacgaggcactgtctgga
ggaagcaccactgaaggctttgaagacttcacaggtggcgtgtctgagatgtacgagctc
cgcaaggctcccagagatctgtacaggattatcggtaaagccctggagagaggctcactg
ttgggctgctctatagacatcaccagtgcctttgacatggaggctgtaacattcaagaag
cttgtgaagggccacgcctactcagtgactggactgaaggaggttgattttcaaggcgac
atgacacgtttaatccgtgtacgtaatccttggggccaggtggagtggactggtgcctgg
agtgacaattcatctgaatgggacgagatcgacccttctgaacgagaggacttgcatctt
cagatggaagacggggagttctggatgtccttcagtgaattcttgagacagttttctcga
ctagagatctgtaacctgacggctgatgctctgagcgaggacgctgtcagccactggaac
accatgaagttctatggcacatggagaagaggcagcaccgctggaggctgcaggaaccac
cccaacacattttggatcaaccctcagtataagatcacgttactggaggaagatgatgac
ccggaggacgatgaggtggcatgcagttttttagtatctctcatgcagaaggatcgtcgc
aggtatcgtcgccaaggtcaggacatgcacaccatcggctttgcgctctatgaggtccca
gaagagtacagaggctgccacaatgtccacttgaagaaagatttctttttgagacactcg
tcgtgtgcacgctcggagacgttcattaacatgagagaagtgagcacacggctgcgcctg
ccacctggggagtacatcgtcgtcccctccacctttgagcccagtaaagaggctgacttt
gtcctcagagtcttcactgagaagcaatcagaaacggaagaactggacgatgaaatctct
gctgatttaggagatgatgatgaaataactgaagatgatattgatgattcctttaagtcc
atgtttgcccagctggcaggagaggatatggagatttcaattcgagagctcaggactatt
ctgaacagagtcgtatcccggcacaaagacctgaagactgatggcttcagtatggagtcc
tgtaggaccatggtcaatctaatggataaagatggtagcgcccgtttgggactggtggaa
tttcagatcctctggaacaagatccggaagtggctgggcatttttagacaatatgacctt
gacaagtctggtgccatgagctcatatgagatgcgccttgctgtggaagcagcaggtttc
aaactaaataacagactgaaccagcttctggtggcccggtatgcagagaacgagatgatt
gactttgacaacttcatctgctgtttggtcaagctggaagccatgttcaggtcttaccgg
cagtttgacaaggaggggtcaggagtggctgagatgaatgtcacagagtggctttacatg
acaatgtgcggatga
DBGET
integrated database retrieval system
