Solea senegalensis (Senegalese sole): 122786527
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Entry
122786527 CDS
T07721
Symbol
pex1
Name
(RefSeq) peroxisome biogenesis factor 1
KO
K13338
peroxin-1
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
122786527 (pex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssen04131
]
122786527 (pex1)
Membrane trafficking [BR:
ssen04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
122786527 (pex1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-2N
PEX-1N
AAA_lid_3
AAA_16
AAA_22
AAA_14
nSTAND3
NACHT
ABC_tran
AAA_18
AAA_28
RNA_helicase
DUF815
AAA_33
TIP49
AAA_2
AAA_5
Sigma54_activ_2
Sigma54_activat
Zeta_toxin
AAA_29
Viral_helicase1
RuvB_N
ATP-synt_ab
AAA_7
TsaE
Mg_chelatase
ATPase
IstB_IS21
AAA_25
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
122786527
NCBI-ProteinID:
XP_043908831
LinkDB
All DBs
Position
LG20:complement(8177305..8186569)
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AA seq
1247 aa
AA seq
DB search
MINNQGIQPVTVVFNNTKNCFLHLPSKVISHLSLKENQALELSWDHGPPLYLSWTHKRTS
SFDSHVVELCRQLGEKLGLKDGEQGFLRPCHQVSSVHQVFVKPLSFDDWEILELHSAALE
QQLLDQIRVVFQDAVFPVWVDSHTVIYIQIASISPSVPYGRLEQFTELVVSPRRRAGSSE
LSASPMGSSEKPHLHRQNDTDPSFSGQPQENTTHVHQWGGIADLRSLLHYVIKGTNDLVK
QLPPVPAIPAILADSVYRVCGAPPDPLCVVSQAVTGVIHVFPWRDGLNSGVIGGSSLVTY
GLLSKVPSPKEMRDRAKQAMEKKKTAGVTKVGASGDGVKELKEEEVMVVRVVCHCNEKLT
GKQRSRSKGEIHSGTVWIPQPLVVQLNIMPHSIVRIKPVKSTTKVASMIRLQPLNPQLEE
DDEEIQTAFLGWLHTQSHEPLACLTARSGTILLHRTDAKLEFTLTVLKPEPENDPPGQLF
LLAHTVIQKEDIQVHRESVTTSAVKAVAEIPKPVLPSLTILGGIDELSRTGFEFISHSLL
GSPLSQELGSTGRGLQGGALLITGAKGSGKSSLSRALCRKAREELDAYIEVVDCRKLQGK
RAESVRQTLQGVFEQAEWRQPSVVLLDDLDHVTGAPTSPEHEHGPEALLQQHIAQSLKDV
VDEMVLHSSLVCLVITSQSEHSLHPSLTEVQGSHIVQRFVNIQPPDQAQRAEILRRLILR
KSTLSDETLQSLDLAAVAKETEGYTPQDLALLLERAVHANTVQTGHNDYGACLLWRDFAQ
ALKGFTPPSLWGLDLYPPNGIGLERVGGLGEVRQQLMDTILLPAKYPILFSNLPIRHRSG
ILLYGAPGTGKTLLARAVAKDSGMNFISIKGPELLSKYIGASEQGVRDVFQRAQAAKPCI
LFFDEFDSLAPRRGHDSTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRP
GRLDKSLYCPPPDLESRVEILRALSTDIPLAADVDLEQLAAVTEQFTGADLKALLYNAQL
EAIHSSMGTSTANELTSGSDSDMSLCSMIFPNNSSGSDYSGGEADAGMCLDQSMVLLEQD
ELQAEDEHHRNNVWRLYFGSSYESEVENSQISGLNSQCISGPNSMGQDCTGASALDPIIS
VPPAYMSSLHSGYEDISPEQLERLQRDVNNIKNNYRKAHEECARVHSASSSPTLLLCQTH
VNSALAVTKPSLSKSDWNRYTKLYESFDGSGEGSSVTFKPGQRVTLA
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atgattaataaccagggcattcaacccgtaactgttgtttttaacaacacaaaaaactgc
tttcttcacctcccgtctaaggtgatatctcatctttccctgaaggagaaccaagctttg
gagttgtcctgggaccatgggcctccactgtacctcagctggactcataagagaacctct
agctttgacagccatgtagtagagctgtgtcggcagcttggagaaaagctgggcttgaaa
gatggagagcagggtttcctcagaccgtgtcaccaagtttcatcagtgcatcaagtgttt
gtgaagcctctgtcatttgatgactgggagatcctggagcttcacagtgccgcactggag
cagcagctgttagatcagatcagagtggtcttccaagatgccgtctttcctgtatgggtg
gacagccacacagtcatttacatccaaatagcatcaatttcaccatctgtgccctacggc
cgtctggagcagttcacagaactagttgtctctccaaggagacgtgctggaagtagtgaa
ctgagtgcctctccaatggggagcagtgagaaaccacatcttcacagacagaacgacact
gatccttctttctcaggacagccacaagaaaacaccactcatgtccatcagtggggtggc
attgctgacctgagaagcctcctacactatgtgataaagggcaccaacgacctggtaaaa
cagttacctccagtacctgccatccctgccatccttgctgactctgtctacagagtatgt
ggtgcacctcctgaccctctttgtgttgtaagccaagctgtaactggtgttattcatgta
tttccttggagggatggactgaattctggagtaattggaggttcatctctggtgacatac
ggtctgctctccaaagttccttcccctaaagaaatgagggacagagccaaacaggccatg
gagaaaaagaagacggcaggggtgacgaaagttggagcctctggggatggagtcaaggag
ttgaaagaagaggaggtcatggtggtcagggtggtgtgtcattgtaatgaaaagctaaca
gggaaacaaaggagtcgcagcaagggagagatccatagtggaacagtctggatcccacag
cccctggttgtccagttgaatatcatgccccattcgattgttagaattaagccagtaaaa
tccactaccaaagtggcctctatgattcgtcttcagcctttaaacccacagcttgaggaa
gatgatgaggagatccagacggcttttcttggttggctgcacactcagagtcatgaacct
ttagcctgtctaactgcacgctctggcaccattcttctccacagaactgatgcaaagtta
gagtttactttaactgtgttgaaaccagaaccagagaatgatcctccaggtcagctattt
ttactagcgcacactgttatacagaaggaagacattcaggtacacagagaatcagtaacc
acgtcagctgtgaaagctgtagctgaaatccccaaaccagtgcttccctccctcactatt
cttggtggcattgatgagcttagtagaactgggtttgagttcatctcccacagccttctg
ggtagtcctctctcacaagagcttggtagcactggtcgggggcttcaaggaggagcttta
ctcatcactggtgccaagggtagtggaaaaagctctctgtcccgagcactctgcaggaaa
gctagggaagagttggatgcctatattgaggtggtggactgtagaaagctacaaggcaaa
agggcagaaagtgtgaggcaaacgctgcagggtgtttttgaacaggcagagtggaggcag
ccgtcagttgtccttcttgacgacctggatcatgtgacgggggcaccaacttctcctgaa
catgagcatggccccgaggccctgctgcaacaacacatcgcacagagtctgaaggatgtg
gtggatgagatggtgcttcactccagcctggtgtgtttggtcatcaccagccaaagtgag
cattctctccacccgtcgctgactgaagtgcaggggtcccacattgtccagagatttgtt
aatattcagccaccagatcaggcccagagagcagagattctgcgccgtctgatcctcaga
aagtctactctgtctgacgagacattgcagagtcttgatctggcggctgttgccaaggag
acagagggttacacacctcaggatttggcactgctgctggagcgagctgtccatgctaac
acagtacaaacgggacacaatgactacggtgcgtgtctattgtggagggactttgcacag
gctcttaaaggattcacccctccctcactctggggtttggacctctaccctccgaatggg
attggtttggagagggtgggaggactgggagaggtgcggcagcagttaatggacactatc
ctgctcccagccaagtatccgatcttgttctccaatcttcctatccgccatcgttcagga
atattattgtatggagctcctggtacagggaaaaccctgctggccagggctgtggccaaa
gacagtggtatgaacttcatcagcattaagggacctgaacttctgagtaagtacattgga
gccagtgagcagggagtccgcgatgtgttccagagagcacaagcggccaagccttgtatc
ctgttcttcgacgagtttgactctttggcccccaggaggggccatgacagcacaggagtg
actgaccgcgtggtcaaccagctcctcactcagctggatggggtggaaggactgcagggt
gtgtatgtgctggcagccaccagtcgtccagatctgattgatcccgccctgctgagacct
ggacgactggacaagtccctctactgtccccctcctgacttggaatctcgtgtggagatc
ctcagggctctgagtacagatattcctctggctgctgacgtggacctggagcagttggca
gcagtgacggagcagttcaccggggcagatctgaaggccctgctctacaatgcacaactg
gaggccattcacagcagcatgggcaccagcacagcaaatgaactgacctctggctcagac
agcgacatgagcctgtgctccatgatcttcccaaacaacagcagtggctcagattattca
ggtggggaggccgatgcaggcatgtgtttggaccagtccatggttctcctagagcaggat
gagctacaggcagaagatgagcaccatcgcaacaacgtctggagactctacttcggaagt
tcctatgagtcggaggttgagaattcacagatttcaggactgaactcccagtgcatctct
ggaccaaactcaatgggccaggactgcaccggcgcatcagccctggaccccatcatctct
gtccctcctgcttacatgtcctccctccacagcggatatgaagatataagccctgagcag
ttggaacgtctacaacgagacgttaacaacatcaagaataactaccgcaaagcccatgag
gagtgtgcccgggttcattcagcctcgagcagcccgaccctgttgctgtgtcagactcat
gtgaactctgccttggctgtgaccaaaccgtcgctcagcaagtctgactggaacagatac
acaaaactgtatgaaagctttgacggttcaggagaaggaagttctgtcacatttaaacct
ggacaacgtgtgactctagcttga
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integrated database retrieval system
