Solibacillus silvestris DSM 12223: SOLI23_00650
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Entry
SOLI23_00650 CDS
T04506
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ssil
Solibacillus silvestris DSM 12223
Pathway
ssil03420
Nucleotide excision repair
ssil03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ssil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SOLI23_00650
03430 Mismatch repair
SOLI23_00650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssil03400
]
SOLI23_00650
Enzymes [BR:
ssil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SOLI23_00650
DNA repair and recombination proteins [BR:
ssil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SOLI23_00650
MMR (mismatch excision repair)
Other MMR factors
SOLI23_00650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C_2
UvrD_C
Viral_helicase1
UvrD-helicase
AAA_19
DEAD
AAA_30
Tex_N
AAA_11
NACHT
SLFN-g3_helicase
AAA_16
ResIII
T2SSE
DUF4359
Motif
Other DBs
NCBI-ProteinID:
AMO84132
LinkDB
All DBs
Position
complement(136130..138352)
Genome browser
AA seq
740 aa
AA seq
DB search
MTAQDFKQEQQRLHETIHYMDRILNSSKRDIETAQENIRTAMANVEYLDSSDSFLNILMN
TRFFELARNQKEGLEAIRQKPYFARIHFQRENEDEEFLYIGKTSLFHSETHEPIIVDWRS
PVANVYYDGRLGDITYDVRDETHSGHLFAKRQYKIENGELINYRDVDLTTNDELLQEALE
GKADVRLTEIVSTIQKEQNEIIRAHLRQPILVQGAAGSGKTTIALHRISYFLYTMGEHFN
PEQLMILAPNRLFIDYIADVLPELGVDKICQTTYAQYVLDALNLKLKLQNPNEQLEQLIA
NPSVQQEYAMISKTKGSAFYELMMNRYIEHYEQQLAALFEDVFIEKYRIMKGEHLRKLFL
VEFHYMPVEKRLERIKKVIQTEVKRKTAAVLATLNTRYEDAIGRALNGMRDAEKRRRTVT
KLIDERDARVPKIKQEAKSVATVNMKKFQKVKVKQLYRELLTNRELLGEVAPEWPLEDVA
HFIKAHQKERWVLEDLAALYFLQAKIKGIDDKWKMRVVFIDEVQDYSYFQLAALKAGLET
DMFTMVGDLAQGIHSYRSLTEWQPVLSLFPRATYATLQKSYRTTIEIMDVANEILMQMDE
DLPLVEPVVRHGKEPEFIVAEGFDPAIIQDVLVKIRDNQHQSIALICKTTHEAVQLIGQL
ENSDVPAQLLDENSAIDQQKLLVIPSHLAKGLEFDAVILTSFDTPYDDNPLDRKLLYVAL
TRAMHELYLIGPSKEAFLMK
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgacagctcaagattttaaacaggaacaacagcgcctgcacgaaacgatccattatatg
gaccggattttaaatagctcaaaaagagatattgagacggcacaggaaaatattcgtact
gcgatggccaatgtggaatatttggattccagtgacagcttcctgaacattttaatgaat
acccgttttttcgagcttgcccgtaatcaaaaagaagggttggaagcgattcgtcaaaaa
ccgtattttgcacgaatccattttcaacgtgaaaacgaagatgaggaatttctttatatc
ggaaaaacctcgcttttccacagcgaaacacatgaaccgatcattgttgattggcgctcc
cctgtcgcaaacgtctactacgatgggcggcttggcgatattacatacgatgtccgggat
gaaacacattctggtcatttgtttgccaagcgccaatataaaattgaaaatggcgaactg
atcaattaccgtgatgtcgatttaacaacaaacgatgagctcctccaggaagcgctcgaa
ggaaaagccgatgtccggttaacggaaatcgtctccactatccaaaaagaacaaaatgaa
attattcgtgcacatctacgccagccgattcttgtacaaggtgcggcaggttcaggtaaa
acaacaattgccctccaccggatttcgtatttcctttatacgatgggcgagcatttcaat
ccagaacagttaatgattctcgcaccgaaccggttatttatcgattatattgccgatgta
ttaccggagcttggcgtcgataaaatttgccagacaacgtatgcgcaatatgtgcttgat
gcactgaacctaaaattaaaacttcaaaatccgaatgaacaactcgagcagctcatcgca
aacccttccgtacagcaagagtatgccatgatttcgaaaacaaaaggcagtgcattttac
gagctcatgatgaaccgctatatcgagcactatgaacagcagcttgcagcattgtttgaa
gatgtattcatcgaaaaataccgcattatgaaaggcgagcatttacgaaagctgtttttg
gttgaattccattatatgcctgtggaaaagcggcttgaacgtattaaaaaggtgattcaa
acagaggtaaagcggaaaactgcagcagtgctcgctacattgaatacgcgctatgaagat
gcaatcggtcgtgcgctaaatgggatgcgtgacgcagagaaacgccgtcgtacagtgaca
aaactgattgatgaaagggatgcccgtgttccaaaaattaagcaggaagcaaaatccgtt
gcaacagtcaatatgaagaagttccaaaaagtgaaagtgaagcagctgtaccgagagctt
ttgacgaaccgtgaattattgggtgaagtggctccggaatggcccttggaagatgttgct
cattttataaaggcacaccagaaagaaaggtgggtgctggaagatttggctgccctttac
tttttgcaggcaaagatcaaaggtattgatgataagtggaaaatgcgcgtcgtgtttatc
gatgaagtacaggattacagctattttcagcttgctgccttaaaagcggggcttgagacg
gatatgtttacaatggttggcgatctcgctcaaggaatccatagctaccggtccctgaca
gagtggcagcctgtactttctcttttcccgcgcgcaacgtatgcaacacttcaaaaaagc
taccgaacaacaattgaaattatggatgttgccaatgaaatcctgatgcagatggatgag
gatttacctctagttgaacctgttgtccgtcatggaaaagagcctgaatttattgtcgcg
gaagggtttgatcccgctattattcaagacgtgcttgtaaaaatccgcgacaatcagcat
caatccattgcgcttatttgtaagacaacacatgaagccgttcagttaattggacagctt
gaaaactccgatgttccggctcagttactcgatgagaattcagcaattgatcagcaaaaa
cttctcgtcatcccaagtcacttggcaaaagggttagagtttgatgcggtcattctcacg
tcatttgacacaccatatgatgacaaccctcttgaccggaaactactgtatgtagcctta
acccgcgcaatgcacgagctttatttgataggcccttcgaaagaggcttttttaatgaag
tga
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