Staphylococcus simiae: SAMEA4384339_1813
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Entry
SAMEA4384339_1813 CDS
T06955
Symbol
polC_2
Name
(GenBank) DNA polymerase III polC-type
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ssim
Staphylococcus simiae
Pathway
ssim03030
DNA replication
ssim03430
Mismatch repair
ssim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SAMEA4384339_1813 (polC_2)
03430 Mismatch repair
SAMEA4384339_1813 (polC_2)
03440 Homologous recombination
SAMEA4384339_1813 (polC_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssim03032
]
SAMEA4384339_1813 (polC_2)
03400 DNA repair and recombination proteins [BR:
ssim03400
]
SAMEA4384339_1813 (polC_2)
Enzymes [BR:
ssim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SAMEA4384339_1813 (polC_2)
DNA replication proteins [BR:
ssim03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SAMEA4384339_1813 (polC_2)
DNA repair and recombination proteins [BR:
ssim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SAMEA4384339_1813 (polC_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
SNX17-27-31_F1_FERM
LOH1CR12
Motif
Other DBs
NCBI-ProteinID:
SNV76098
LinkDB
All DBs
Position
1:1899226..1899780
Genome browser
AA seq
184 aa
AA seq
DB search
MTNNSFVALDFETANGKRTSICSVGMVKVIDNQITESFHTLVNPQDYFSQQNINVHGIEP
QDVEQSPTFDYVYPYMMQFIDHLPVVAHNAAFDMNVLHQSIKKIGLPTPTLNYFCSYQLA
KRTVDSHRYGLKYMMDFYHLDFHGHHDALNDAKACAMITFRLLKHYNDLNHVMTIYGKNL
QDKG
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgacaaataattcgtttgtggcacttgattttgaaacggcaaatggtaaacgaacaagt
atatgttctgttggtatggttaaagttatcgataatcaaattacagaatcattccatact
ttagttaatcctcaagactatttttcacaacaaaatattaatgtacatggaattgaacca
caagatgttgaacaatccccaacatttgattatgtttatccgtatatgatgcaatttatt
gatcatttaccagttgttgcccataatgcagcttttgatatgaatgtattgcatcaaagc
attaaaaaaataggcctcccaacaccgaccctcaattatttttgcagttatcaactcgcc
aaacgaactgtagattctcatcgttacgggttaaaatatatgatggatttttatcattta
gattttcatggtcatcacgatgccttaaatgatgctaaagcttgtgcaatgattacattt
agattattaaaacattataatgatcttaaccacgtaatgacgatctatggcaaaaattta
caagataaaggttag
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