Sphingomonas sinipercae: G7078_02620
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Entry
G7078_02620 CDS
T07461
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ssin
Sphingomonas sinipercae
Pathway
ssin03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ssin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
G7078_02620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssin03400
]
G7078_02620
Enzymes [BR:
ssin01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
G7078_02620
DNA repair and recombination proteins [BR:
ssin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
G7078_02620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
QIL03265
UniProt:
A0A6G7ZQR1
LinkDB
All DBs
Position
497593..499035
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AA seq
480 aa
AA seq
DB search
MTDVRRVTLTAPDDFEGWRDSARDLAEAGVPPDAVVWQVEGKEADLFGSDAPALTAPSFA
VPRSFVSLARDAICHSDPERFALLYALLWELRGNRAAVSNSADPLVRRIELLAKEVRRDL
HKMHAFVRFRELDEPGGDTRFVAFFEPDHHIVRRGARFFVNRFANMRWSILTPELSVHWD
GDVLTEGPGATRAEAPAGDPLEAMWGTYYASIFNPARLKVGAMLKEMPKKYWRNMPETSL
VQPLIAGARARELEMIDRSAAKLGFDNALQAERGIERGSNIRAAWEALFKEAWGCTRCEL
FKCGTQTVFGEGPLDPKLMFVGEQPGDQEDLAGRPFVGPAGQLLDQMLEEAGVDRAQTYV
TNAVKHFKFERRGKRRIHSKPDSGEIEACRWWIDQERTLIRPPITVALGATAARSLFGKA
VTIGKVRGSPMALPDGSECWVTMHPSALLRMPEPERREEERARFVTEMREIWKRAETLAV
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgttcgccgggtgacgctgacggcgccggacgatttcgaaggctggcgcgat
tcggcgcgcgacctggccgaagctggtgtgccgcccgacgcagtcgtctggcaggttgaa
ggcaaggaagccgacttgttcggaagcgacgcgccggcccttactgcaccgagcttcgcc
gtgccccgctcattcgtttcgcttgccagggacgcgatttgccattcggaccctgaacgg
ttcgcgttgctttatgccttgctgtgggaattgcgcggcaatcgggcggccgtttccaat
tccgccgacccgctggtgcgccgtatcgaactgctcgccaaggaagtccgccgcgacctt
cacaagatgcatgcgttcgtgcgcttccgtgagctggacgagccgggcggcgacacacgg
ttcgtcgctttcttcgaacccgaccatcacatcgtccgccgcggtgctcgcttcttcgtc
aaccgtttcgccaacatgcgctggtcgatcctgacgccggaactgtccgtgcattgggac
ggcgacgtgctgaccgaagggccgggggcgacgcgcgccgaggcgcccgccggcgatccg
ctggaagccatgtggggcacctattacgcatcgatcttcaaccccgcgcggctgaaggtg
ggcgcgatgctgaaggaaatgcccaagaaatattggcgcaacatgccggaaacgtcgctc
gttcaaccgctgatcgcaggcgcgcgtgcacgggagctggagatgatcgaccgatcggcg
gcgaagctagggttcgataatgcgctgcaagcggagcgcgggatcgagcgcggcagcaac
attcgtgccgcctgggaagccctgttcaaggaagcgtggggctgcacccgatgcgaactt
ttcaaatgcgggacgcagaccgtgttcggcgaagggccgcttgaccccaaattgatgttc
gtcggcgagcaaccgggggaccaggaggaccttgccgggcggccgttcgtcggccccgcc
gggcaattgctggaccagatgctggaggaagcgggcgtcgaccgcgcccagacctacgtc
accaacgcggtcaagcatttcaagttcgaacggcgcggcaagcggcgcatccacagcaaa
ccggacagtggcgaaatcgaagcctgccggtggtggatcgaccaggagcgcacgctgatc
cgaccgccgattaccgtcgcgctcggcgccacggccgcgcgttcgctgtttggcaaggcg
gtgacgatcggcaaggtgcgcggcagcccgatggcgctccccgacggttcggaatgctgg
gtgacgatgcaccccagcgcgctgttgcggatgccggagcccgagcgccgcgaggaggag
cgcgcccgcttcgtcacggagatgcgcgagatctggaagcgggccgagacactcgccgtc
tga
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