Streptomyces sirii: WAB15_32860
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Entry
WAB15_32860 CDS
T11107
Name
(GenBank) AlkA N-terminal domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
ssir Streptomyces sirii
Pathway
ssir03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ssir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
WAB15_32860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssir03000
]
WAB15_32860
03400 DNA repair and recombination proteins [BR:
ssir03400
]
WAB15_32860
Enzymes [BR:
ssir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
WAB15_32860
Transcription factors [BR:
ssir03000
]
Prokaryotic type
Helix-turn-helix
AraC family
WAB15_32860
DNA repair and recombination proteins [BR:
ssir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
WAB15_32860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
DUF6233
Motif
Other DBs
NCBI-ProteinID:
WXK80419
UniProt:
A0ABZ2R1K0
LinkDB
All DBs
Position
7389744..7391216
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AA seq
490 aa
AA seq
DB search
MHTDTERCLRAVQSKDARFDGWFYTAVLTTRIYCRPSCPVVPPKPENMRFYPSAAAAQQA
GFRACKRCRPDASPGSPQWDERADLTARAMRLIADGIVDREGVPGLAARLGYSTRQIERQ
LLAELGAGPLALARAQRAQTARLLVETTALPMAEVAFAAGFASIRTFNETVREVFALSPT
DLRQRARPGPCAAVPGTLALRLPFRQPLNPDNLFGHLAATAVPGVEEWRDGAYRRTLSLP
YGHGIVALAPRPDHIDCRLALTDLRDLAGAIARCRRLLDLDADPEAVDGLLREDPQLAPL
VAKAPGRRVPRTVDAAEFAVRAVLGQQISTAAARTHAGRLVRAHGERVDDPGGGLSHLFP
SAAALAALDPESLAMPRTRRATLTGVIAALASGALHLGVGSDRDEARARLAALPGIGPWT
VECIAMRGLGDPDAFTPTDLGLRRAAAGLGLPHTPAALVRHSAVWRPWRAYAVQYLWATD
DHPINHLPTN
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgcacaccgacaccgagcgctgtctgcgcgccgtgcagtccaaggacgcccgcttcgac
ggctggttctacacggcggtgctcaccacccgtatctactgccgccccagctgccccgtg
gtgccgcccaagcccgagaacatgcgcttctacccgagtgccgccgccgcccagcaggcc
gggttccgggcctgcaagcggtgccgcccggacgccagccccgggtccccgcagtgggac
gagcgggccgatctcaccgcccgcgccatgcggctgatcgccgacggcatcgtcgaccgc
gagggcgtccccggcctcgcggcccggctcggctacagcacccggcagatcgagcggcaa
ctgctggccgagctgggtgccgggccgctcgccctggcccgcgcccagcgcgcacagacc
gcccggctcctggtggagaccaccgcgctgccgatggccgaggtcgccttcgccgccggc
ttcgccagcatccgcaccttcaacgagacggtgcgggaggtcttcgcgctctccccgacc
gacctgcggcagcgggcccggcccggtccgtgtgcggcggtccccggcacgctcgcgctg
cgactgcccttccgacagccgctgaaccccgacaacctcttcggacatctcgcggccacc
gccgtccccggcgtcgaggagtggcgggacggcgcctaccgccgcaccctgagcctccct
tacgggcacggcatcgtcgcactcgcgccccggccggaccacatcgactgccggttggcc
ctcaccgacctgcgcgatctggccggcgccatcgcccgttgccgccggctgctcgacctc
gacgcggacccggaagccgtcgacgggctgctgcgcgaggacccgcagctggcaccgctg
gtcgccaaggcgccaggccgccgggtcccgcgcaccgtcgacgccgccgagttcgccgtc
cgcgcggtcctcggccagcagatctccaccgcggccgcccgtacccacgccggacggctg
gtccgtgcacacggcgagcgggtcgacgacccgggcggcggcctcagccacctcttcccg
tccgccgccgcgctcgccgcactcgaccccgagtcgctggccatgccccgcacccgccgc
gccacgctcaccggggtcatcgccgccctcgcctccggagccctgcacctcggcgtcggc
agcgaccgggacgaggcccgcgcccggctcgccgcgctgcccggcatcggcccctggacc
gtcgagtgcatcgccatgcgcggcctcggcgaccccgacgccttcaccccgaccgacctc
ggactgcgccgcgcggccgccggcctcggcctgccgcacaccccggcggccctggtgcgg
cactccgcggtctggcgcccctggcgcgcctacgccgtgcagtacctctgggcgaccgac
gaccaccccatcaaccacctcccgacgaactga
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