Wolbachia endosymbiont of Oryzaephilus surinamensis: MJ631_02610
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Entry
MJ631_02610 CDS
T08492
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
ssiv
Wolbachia endosymbiont of Oryzaephilus surinamensis
Pathway
ssiv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssiv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MJ631_02610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssiv03019
]
MJ631_02610
03009 Ribosome biogenesis [BR:
ssiv03009
]
MJ631_02610
Enzymes [BR:
ssiv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
MJ631_02610
Messenger RNA biogenesis [BR:
ssiv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MJ631_02610
Ribosome biogenesis [BR:
ssiv03009
]
Prokaryotic type
rRNA processing factors
MJ631_02610
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
UXX40850
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All DBs
Position
612354..614102
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AA seq
582 aa
AA seq
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MVSDGKRLLLIESTTCSNEVRVALLVNGRVVEFEQEFKEKKQLRGNIYVAYVKRIEPALQ
AVFIEYGKNKQGFLSFSEISLNYFNIPEKEKEIFPDEDYSSGVDCSNDNCTEEGLDSTAS
NESSSGFVREVPLHRKYKLQDVISVNQKLLVQLTKEERGNKGASFTTYVTLVGRYCVFMP
NSISRGGVSRRIEDTNVRKQLKDILNSINLPKGSGLIVRTVGAGKSKKEIEQDYNNLTLL
WQNIQQNFSSLNVPSLIYNEADVVMRSVRDFCSNDTEIIVSDREVCEAVRKYTKNVLQGK
LRPRLYRGSVPIFTYYRVEDQISELYSNRVELPSGGSLVITLTEAFVSIDVNSGKMTGED
NIEETAYRTNMEALSEISRQANLRGLSGLIVVDFIDMLKLEYCKNVEFAIKQAFKDDKAK
VQFSFINDFGLMVFSRQRIKPNIQEINTTECLRCKGIGRVKSNEVVVASILRDLQHIANK
NQNKSFDLIARSAVIAHIFNNKRDMVSTIEKEFNITLNVSIDNSLDADTFILKQGDHINF
NDYKPLQNSGCQIVNSRDKEAGKLPGNFWLTKWLSRLLGSNN
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
gtggtgagtgatggcaaaaggttattgttgatagaaagtactacctgttctaacgaggta
agggttgccctactagttaatggtagggttgtagagtttgaacaagaattcaaggaaaaa
aaacaattaagaggtaatatatacgttgcttatgtaaagcgtatagagcctgctttgcag
gccgtgttcattgagtatggaaaaaataagcaaggttttttgtctttttctgagatatct
ctaaattattttaatattccagaaaaagagaaggaaattttccctgatgaagactattcg
agcggtgtggactgttcaaatgataattgcacagaagaaggcctagattctacagctagt
aatgaatccagcagtggttttgtgagggaggtacctttacatagaaaatataagttacaa
gatgtgatttcagtaaatcaaaagttattggttcaattaactaaagaagaacgaggaaat
aaaggagcttcatttacaacatacgtaactttggtcggtagatactgtgttttcatgccc
aattccataagtaggggtggagtatctcgcagaattgaagataccaacgttagaaaacag
ttaaaggatatattaaattcaataaatttaccaaaaggctcaggtttaatagtaagaact
gttggtgcaggaaaaagtaagaaagaaattgagcaagattacaataatttgaccttatta
tggcaaaatatccagcaaaacttctcttctttaaatgttccatcattaatttacaacgaa
gcagatgtagttatgagatctgtacgtgacttttgtagtaatgatacagaaattatagta
tctgatagagaagtttgtgaagcggtaagaaaatacactaaaaatgtgttacaaggaaaa
ttgcgtcctagattatatagaggttctgttccaatctttacttactatcgagtcgaagat
caaatttctgaattatatagcaatagagtagaattgccatctggtgggtctttggtgata
accttaactgaggcatttgtttcaatagacgtaaattcagggaaaatgacaggagaagat
aacatagaagaaacagcttatagaactaatatggaggcattatctgaaatatcaaggcaa
gcgaatctcaggggcttatcagggttaatagttgttgattttattgacatgttgaaactt
gagtattgcaaaaatgttgaatttgctatcaagcaggcgtttaaagatgataaagctaaa
gttcaatttagctttatcaatgactttggtttaatggtcttttcaagacaaagaattaaa
ccaaatatacaggaaattaatactacagagtgcttacgctgtaaaggtattggaagagtg
aaatcaaacgaagtggttgttgcatcgatactaagggatttgcaacatattgctaataaa
aatcaaaataagtcctttgatttaatagcacgcagtgcagttatagcgcacatttttaat
aataagcgtgatatggtttctacaatcgaaaaagagttcaatattacattaaatgttagt
attgataatagtttagatgcagatacatttattttaaagcaaggagaccatattaatttt
aatgattataagccattgcagaattctggatgtcaaattgtgaatagcagggataaagaa
gctggtaaactaccgggcaacttttggttaactaaatggctttcgcgccttttgggctct
aacaactaa
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