Sphingobacterium siyangense: JVX97_12810
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Entry
JVX97_12810 CDS
T08059
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
ssiy
Sphingobacterium siyangense
Pathway
ssiy01501
beta-Lactam resistance
ssiy01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ssiy00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JVX97_12810
01503 Cationic antimicrobial peptide (CAMP) resistance
JVX97_12810
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssiy02000
]
JVX97_12810
01504 Antimicrobial resistance genes [BR:
ssiy01504
]
JVX97_12810
Transporters [BR:
ssiy02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
JVX97_12810
Antimicrobial resistance genes [BR:
ssiy01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JVX97_12810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Patched
Motif
Other DBs
NCBI-ProteinID:
QRY60267
LinkDB
All DBs
Position
complement(3090222..3093410)
Genome browser
AA seq
1062 aa
AA seq
DB search
MLKKFIERPVLATVISILLVILGVIGILKLPLQQFPDIAPPAVQVTALYPGANAETVLRA
VAPSLEESINGVENMSYMSSTASNDGSLMITVYFKLGTDPDQAAVNVQNRVAQATSQLPA
EVVQAGITTAKQQNSLIMVLDLYTEDQSKYDQTFITNYAQINIIPELKRIPGVGQALPFG
GSKDYSMRVWLNPNQMATYKLTPEEVMAAIQDKNVEAAPGKFGESSREAFEFVIKYKGKL
NQPSDYENIIIRSNTDGSVLKLKDVARVELGSYTYASHTRINGKAGLNIGVMQLAGSNAN
EIQIAIQKFMEKASLSFPKGVKYLVLYNTKDALDQSIDQVKHTLVEAFILVFLVVFLFLQ
DFRSTLIPAIAVPVAIVGTFFFMQLFGFSINLLTLFALVLAIGIVVDDAIVVVEAVHAKM
EHENLPPKLATTSAMSEITGAIISITLVMSAVFLPIGFMEGSTGVFYRQFAFTLAIAIVI
SAINALTLSPALCALFLKPTHHGHADAKKLNFKERFFAGFNVGFDRLTKNYLGSLRFLIR
YKWVAFAGLGITLLLTVFMIRKTPTGFIPSEDQGFIAVSLSMPAGASLDRTSGALAEAEK
QLQHADFTKTLNVLAGFNILTQSTSPSAGVAFILLKPHEERGKIKDINAIMADVNQRLAN
IKGANFFVFTFPTVPGFSNVDGLDMVLQDRTGGQLGKFSGIGQKFIGELMKRPEIMMAFT
TFKADYPQYELQVDDIKAEQLGVSTKSILQTMQAYFGSAQASDFNRFGKYYRVMVQADAK
DRSEPTSMDGIFVKNRLGDMVPINTLVKLERVYGPETASRYNLFNSIGINAIPKPGYSSG
DAIRAVEEVAKQQLPTGFTYEFSGMTKEEIVSGGQSTLIFILCLIFVYFLLAAQYESYII
PLAVILSIPTGIFGVFAAISFTDIANNIYVQVALVMLIGLLAKNAILIVEFAIQGRKQGL
SIPSAALKAARLRLRPIIMTSLAFIVGMIPMMTAVGPSAQGNHSISIAAAGGMFTGVVLG
LFIIPILFIFFQFIQEKIGGSPKQKQHENNAISLEIPVHTNN
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgcttaagaaatttatagaaagacctgtacttgctaccgttatctccatattacttgtc
atattgggggtgattggtatcctcaaactgccattgcagcagtttcccgatattgcaccg
cccgcagtgcaagtaacggcattatatcctggggcaaatgccgaaacggtccttcgtgcc
gtagccccctcactcgaagagtcaatcaacggtgttgaaaatatgagctacatgagctct
accgccagcaacgacggttcgttaatgattacggtatattttaaacttggtacagaccct
gaccaagctgctgtaaacgtccaaaatcgtgtggctcaggcaaccagccaattgccggct
gaggttgtacaagccgggatcaccacggcaaaacagcaaaacagcttgatcatggtattg
gatctttatacggaagatcagagtaaatacgatcagacctttattaccaattacgcccag
atcaatattattcctgaactgaaacggatacctggggttggacaagcattgccatttggt
ggtagcaaagactactccatgcgcgtatggctcaatccaaatcaaatggcgacctataaa
ttaacgcctgaggaagtaatggccgccatccaagataaaaacgtcgaagctgctccgggt
aaattcggagagagcagccgtgaagcttttgaatttgtaatcaaatataaaggtaaactc
aaccagccaagtgattacgaaaatattattatccgctccaatacagacggttctgtacta
aaactcaaagacgtcgctcgtgtcgaactgggatcttatacctatgcgagtcatacgcgc
atcaacggtaaagcaggattgaatattggggtcatgcagcttgcaggttcgaatgcaaat
gaaattcagattgccattcaaaaattcatggagaaagcctctttaagctttccaaaaggt
gtcaaatatctcgttttatacaacacaaaagatgcacttgatcaatctattgaccaagta
aaacatacactagttgaagcatttatactggtatttttagttgtctttctattccttcaa
gattttagatcgacattgataccagcgattgcggtaccggtagccatcgtgggaacattt
ttcttcatgcagctcttcggcttttcaatcaacctactgactttgtttgctctggtgcta
gccattgggattgtcgtcgatgacgcgattgtggttgtggaggctgttcatgccaagatg
gagcatgaaaatctcccgcctaagcttgctacgacatctgccatgagtgaaatcacaggc
gccatcatctcgattacattggtgatgtctgccgtattccttcccatcggctttatggaa
ggctctaccggggtgttttaccgacaatttgctttcaccctggcgattgcaatcgttatt
tcagcaatcaatgccttgacactaagccctgcgttatgtgcgctcttcttaaaaccaacg
catcatggtcatgctgatgccaagaaacttaatttcaaagagcgtttcttcgctggattc
aatgtcggatttgatcggttgacgaagaattatttaggtagtttacgcttcttgatccgt
tataagtgggttgcatttgcaggattgggaattaccctacttttgactgtatttatgatc
cgtaaaacacctactggattcatcccttcagaggatcaaggattcattgctgtatcctta
tctatgccagcaggtgcttctttggatcgtacctctggagcattagccgaagcagagaag
caacttcaacatgctgattttaccaaaactttaaatgtacttgctggtttcaatattttg
acacaatccacaagtccatcagcaggtgttgcatttatcctccttaaaccacatgaagaa
cgtggtaagataaaagacatcaatgctattatggccgatgtcaatcagcgattggcaaat
atcaaaggcgcaaatttctttgtctttaccttccctactgtcccaggattcagtaacgtg
gatggtctggatatggtactgcaggaccggaccggtggacaactcggaaaattcagtggc
ataggccaaaagtttattggcgaattgatgaaacgtccagaaattatgatggctttcaca
acctttaaagcggattatccacaatatgaactccaggtagatgatatcaaagcagaacaa
cttggcgtaagcacaaaaagcattttacagactatgcaagcctattttggtagtgcccaa
gcctcagattttaatcgttttggaaagtattatcgtgtgatggttcaagctgatgccaag
gatagaagtgaaccaacttcaatggacggtatttttgtaaaaaacagattgggagacatg
gttcccatcaatacattagtcaaattagaacgtgtatatggtccggaaactgcatctcgt
tacaacttatttaattcgattggaataaatgcgataccaaaaccaggatatagttctgga
gatgctatccgtgcggttgaagaagttgcaaaacaacaattgccgaccggatttacttat
gagttctcaggtatgactaaagaagaaattgtctccggaggccaatccacattgattttt
attctctgtctgatattcgtttattttctgcttgcggcacaatatgaaagctatatcatt
ccattggcggttattctctccattcctacaggtatatttggggtcttcgcagcaattagc
ttcactgatattgccaacaacatctatgtacaagtcgcactcgttatgttgattggatta
ttggccaaaaatgccattctgatcgtagaatttgccatccaagggcgtaaacagggacta
tcaattcctagtgccgcacttaaagcagcgagattacgtttgagacctattattatgact
tctttagcttttatcgttggtatgattccaatgatgacagcggtaggtccatcagcgcaa
ggaaatcactcaatcagtattgccgctgcgggagggatgttcactggagtagttttagga
ctctttattatccctattctctttattttcttccaatttatccaagagaaaataggaggt
tctccaaagcaaaaacaacatgaaaacaatgccatttcgttggaaatacccgtgcataca
aacaattag
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