Entry |
|
Name |
(RefSeq) hypothetical protein
|
KO |
K10838 | xeroderma pigmentosum group C-complementing protein |
|
Organism |
ssl Sclerotinia sclerotiorum
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:ssl00001]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SS1G_14098
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:ssl03400]
SS1G_14098
DNA repair and recombination proteins [BR:ssl03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
SS1G_14098
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
Unknown
|
AA seq |
999 aa
MPPFLPRKRLRSSSPESGPSKQQNLRGKKSKSLKPTPRKATLFDDLDAGAKTLEDTKAIL
QKIQATDDDDDESSLSSLSDDEFEDVPNTNRGPRDDATDEEDEDVEFEDVDTNIINKPSA
NIPTGDLELTLTKDTRISLTNTLGSKKGPSKIERGIRMATHQIHVQMLMWHNAIRNSWLC
DKELQQILVGQLPETVLREIEKWRKDSGLQIKADDTPKSKGKGKGKDTKGKKVDVRSQRD
WGEPAAKQEAGEVNMSRGDPLFRLLKLLMNYWKQRFRIITPGLRKVGYMSLHRLDQEHKS
FQEGEHDVERHGERIVDIHEYRKCAKSMEGSRDVGAQFFTALLRGIGIESRMVASLQPVG
FGWNKNEDAGERKDKKRTEATPADDTSNSESSEEEKPVPKPASKPAKKVNGKGRAASITK
KPTKSATTNSELLQKFEPRGAKADKAKQVTAYIVGHSQDDLKAVQPKKKEVKEGEETLQS
YKSSAEFVLERHLRREEAILDTAKHVKMFTVKAKGDNPTEEKVFLRKDVVSCKSLETWHK
EGRAPMPGAIPRKRVPYRAATTNRKRELAEAELESGEKMLQGLYSRDQTDWIIPPPIENG
VIPKNSYGNMDVYVQSMVPVGAVHIPRRGTKRICTRLGIDYAEAVTGFEFGARMAIPIIT
GVVVAEENLELVMEEWEKDEAERVRKEDEKKTKAAISMWRKMIMGLRIIERMTDEYGSHG
GHEVDLVNPFNNRNKKEKEVGRDSNSEEQAIEMQQQDEEMAGGFFPKGHDEEEPDMHHST
SFFPVVASQEDADEDEGGGGFIVEDEERETSNETNETLSATSQRFQFIGDENTDTNPTSD
DESEEEMKNKKPQAILPAPTPRTRGRPAGSTNKALPKIKPSDSNSKPRTPAKRAAPAPKA
SGKRKRIPDSEDEDDDDSSSSLSDIGMDDEEEDEDVAAPPKKSLAKKREPVAKRGVTTPA
ASTPPVRKTPRRNAKRVSETGTRSRYFEHVGDSEEDEDD |
NT seq |
3000 nt +upstreamnt +downstreamnt
atgcctcctttcctcccgcgcaaacgtctgcgttcttcatccccagagtcaggcccctca
aagcagcaaaatctcagaggcaaaaaaagtaaatcattgaaacccactccacgaaaagct
acattatttgatgatctcgatgctggagccaaaactcttgaagatactaaagctattcta
cagaaaatccaagctacggatgatgatgacgacgagagctcattatcgtccctttctgac
gacgaatttgaggatgtcccaaatacgaacagaggcccgcgagatgatgcgacagatgag
gaggacgaagatgttgaattcgaggatgtcgatacaaatataataaataaaccatctgcg
aacatacctactggtgatctcgaacttacattaacaaaagatacgaggatatcgctcaca
aatacgctgggatcgaagaagggaccaagcaaaattgagaggggaattcggatggctact
catcaaattcatgtgcaaatgttaatgtggcataatgcgattagaaattcttggctttgc
gataaggagttacagcagattctagtaggacaattaccggaaacagtcttaagggagatt
gaaaaatggaggaaggatagtggactacaaatcaaggcagatgacactccaaagtcgaag
ggaaagggaaagggcaaggatacaaaagggaagaaggtcgatgttaggagtcaaagggat
tggggggagcccgcagcaaagcaggaggctggcgaggtcaatatgagtcgtggggatcct
ttgtttcggcttctaaaattattgatgaattactggaagcaaaggtttaggataatcacg
ccagggcttcgaaaggtcggctacatgtctctccataggcttgaccaggaacacaagagc
tttcaagaaggtgaacacgatgttgaacgccacggagaaagaatagtagatatacatgaa
tatagaaaatgtgccaaatctatggaaggaagccgagatgttggcgctcaatttttcaca
gctttattaagaggaatcggtattgaatcaagaatggttgctagtcttcaacccgtagga
tttggttggaacaaaaacgaagatgcaggggagagaaaggataaaaaaagaacagaagct
acaccggctgatgatacttcgaattctgagagtagcgaagaagaaaagcctgtcccgaag
cctgcctcaaagccggcaaagaaagtaaatggaaaaggaagagccgcctcgataaccaag
aagcctacgaaatctgccacaactaattccgaacttctacaaaaatttgaaccccgtggt
gcaaaggccgataaagccaaacaagtcactgcttacattgttggacattcacaagatgac
ctcaaagctgttcagcccaagaaaaaggaagtgaaggaaggagaggaaactcttcaatcc
tacaagtcttctgctgaatttgtactggaaagacatcttagacgagaagaagctatcctt
gatacagcaaaacatgtaaaaatgttcactgtcaaagcgaaaggcgataatcctacagaa
gaaaaggtctttcttcgaaaagacgtcgtcagttgtaaaagcttggagacatggcataag
gaaggccgagcacccatgccaggtgcaataccacgaaaacgtgttccttatcgagcagca
acaacaaatcggaagcgtgagcttgctgaagcagaacttgaaagtggagagaaaatgtta
caaggtctttatagccgtgatcaaactgattggattattcctccacctattgagaatggt
gtcattccgaagaatagctatggaaatatggatgtttatgtgcagagtatggtaccagtg
ggtgcggtccatattccgagaagaggcacaaagaggatttgtacacggctaggaattgat
tatgcggaagctgttactggatttgaatttggtgctaggatggctataccaattattact
ggtgttgtggtggctgaggagaatctagagctggtcatggaagaatgggagaaagatgaa
gcggagagagttagaaaagaggatgagaagaaaactaaagccgctattagtatgtggagg
aagatgataatgggacttcggattatcgaaagaatgacagatgaatatggaagtcatggt
ggacatgaagtagacctcgtcaatccgttcaataatagaaataagaaagaaaaggaagtc
ggccgagactctaattcggaagagcaagcgatcgagatgcaacaacaggatgaagaaatg
gcaggcggttttttccctaaagggcacgatgaagaggagccggatatgcatcattcgact
agtttctttccagttgttgcatcgcaagaagacgcagatgaggatgagggaggaggagga
tttattgttgaagacgaggaacgagagacaagtaatgagactaatgaaactttatctgcc
acatctcaaaggtttcaattcattggagacgagaataccgacacaaacccaacttccgat
gacgaatcagaagaagaaatgaaaaataagaaaccacaagccatattacctgctccaact
ccccgcactaggggaaggccagctggttcaacaaacaaagcccttcccaaaatcaagcct
tcggactcaaattctaaaccaagaactcccgcaaaacgcgccgctcctgcaccaaaagct
tctggtaaacgaaaacgtatcccagactccgaagacgaggatgatgatgattcttcttct
tcactctctgatattggaatggatgatgaggaagaagatgaagatgttgcggcaccgccc
aagaaatcattagcaaagaaacgtgaaccagtagctaaaaggggagttactacaccggcg
gcttctaccccgccggtgaggaaaactccaagaagaaatgcaaagagagttagtgagacg
gggacgagatcgcgttatttcgaacatgtaggagatagtgaagaggatgaggacgattga |