Sediminispirochaeta smaragdinae: Spirs_1611
Help
Entry
Spirs_1611 CDS
T01287
Name
(GenBank) 3-isopropylmalate dehydratase, small subunit
KO
K01704
3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
ssm
Sediminispirochaeta smaragdinae
Pathway
ssm00290
Valine, leucine and isoleucine biosynthesis
ssm00660
C5-Branched dibasic acid metabolism
ssm01100
Metabolic pathways
ssm01110
Biosynthesis of secondary metabolites
ssm01210
2-Oxocarboxylic acid metabolism
ssm01230
Biosynthesis of amino acids
Module
ssm_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
Spirs_1611
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
Spirs_1611
Enzymes [BR:
ssm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
Spirs_1611
4.2.1.35 (R)-2-methylmalate dehydratase
Spirs_1611
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aconitase_C
Motif
Other DBs
NCBI-ProteinID:
ADK80738
UniProt:
E1R5X3
LinkDB
All DBs
Position
1727965..1728483
Genome browser
AA seq
172 aa
AA seq
DB search
MSDTTMKRKGRCFVFGDNVNTDEIIPARYLSTSDPAELALYCMEDARSGFGRRDDLAGSI
MIAGENFGCGSSREHAPISIKASGIGCVIAKSFARIFLRNSFNIGLPIIELPEADQFGEG
DEVEIDFDRGLVRNLTKNKEFTFNPYPEFLKKVIDYGGWLSYAKAELMKEGA
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataccaccatgaaacgcaagggcagatgttttgtcttcggggataacgtcaat
acggacgagattatccccgcacgttacctttccaccagcgaccctgcagagttggctctc
tactgcatggaggatgccagaagcggcttcggccgtagggacgatcttgcaggatcgatc
atgattgccggtgaaaacttcggctgcggctccagccgcgagcatgctcccatatcgatc
aaggcctcgggtatcggctgcgtcatcgccaagagctttgctcggatattcctgcgcaat
agcttcaatatcggtcttcccatcattgagcttcccgaagccgaccaattcggcgagggc
gacgaggtcgagatcgattttgatcggggacttgtacgtaaccttacgaagaataaagag
tttacgttcaacccctatcccgagtttttgaaaaaggtgatcgattacgggggctggctt
tcctatgccaaggccgaattgatgaaggagggagcatga
DBGET
integrated database retrieval system