Shigella sonnei Ss046: SSON_2056
Help
Entry
SSON_2056 CDS
T00274
Symbol
pocR
Name
(GenBank) pdu/cob regulatory protein
KO
K27259
AraC family transcriptional regulator, pdu and cob operon regulator
Organism
ssn
Shigella sonnei Ss046
Brite
KEGG Orthology (KO) [BR:
ssn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssn03000
]
SSON_2056 (pocR)
Transcription factors [BR:
ssn03000
]
Prokaryotic type
Helix-turn-helix
AraC family
SSON_2056 (pocR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PocR
Creatininase
At5g52880_ARM
Motif
Other DBs
NCBI-ProteinID:
AAZ88712
ShiBASE_China:
SSO2056
UniProt:
Q3Z0K0
LinkDB
All DBs
Position
complement(2154849..2155496)
Genome browser
AA seq
215 aa
AA seq
DB search
MISAATLNSELINKIAQDFAQATSLAVVVVNIHGDEISELFNFTPFCQMMRQHPQLSTRC
RMSDRCGGLEASKSDQPCIYRCHAGLTDFSIPLVIAGHLVGFVLCGQVRLRNDDVDLVDI
LNVDDCWQADPELLNEFRKVPEMDYSRVMASADLLKLIVENCLKKQLNFVVIKENKSRSD
SVRQTRAPNPHDNTVIFAKFSVRLIRLRRRCIDSK
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgatttctgcggcgacacttaattcagaactcattaataaaatcgcgcaggattttgcg
caggcgaccagccttgcggttgtcgtggtcaatattcacggcgatgaaatttccgagctg
tttaacttcactccattttgtcagatgatgcggcaacaccctcagctaagcactcgatgt
cgcatgagcgatcgttgtgggggcctggaagcctctaaatccgatcagccttgtatttat
cgctgtcatgccggattaaccgatttctctattccactggtaatcgccggacatttagtc
ggttttgtattgtgcgggcaagttcgtctgcgtaatgatgatgtcgatttggtcgatatt
ctgaatgtcgatgattgctggcaggcagatcccgaattacttaatgaattccgcaaagtt
cctgagatggattactcaagagttatggcctctgctgatttgttgaagttgattgtggaa
aattgcctcaaaaaacaactcaattttgtggttattaaagagaacaaatctcggtcagat
tcggtgcgccagactcgtgcgcctaatccccacgacaatacagttatttttgcaaagttt
tccgtcagacttatcaggttacgccgcaggtgtatcgacagcaagtga
DBGET
integrated database retrieval system
