Streptococcus sobrinus: DK181_00765
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Entry
DK181_00765 CDS
T05567
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
ssob
Streptococcus sobrinus
Pathway
ssob03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ssob00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DK181_00765 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssob03021
]
DK181_00765 (rpoB)
03400 DNA repair and recombination proteins [BR:
ssob03400
]
DK181_00765 (rpoB)
Enzymes [BR:
ssob01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DK181_00765 (rpoB)
Transcription machinery [BR:
ssob03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DK181_00765 (rpoB)
DNA repair and recombination proteins [BR:
ssob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DK181_00765 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
AWN18069
LinkDB
All DBs
Position
118578..122162
Genome browser
AA seq
1194 aa
AA seq
DB search
MAGHDVQYGKHRTRRSFSRIKEVLDLPNLIEIQTDSFKDFLENGLKEVFEDVLPISNFTE
TMELEFVGYELKEPKYSLEEARIHDASYSAPIFVTFRLINKETGEIKTQEVFFGDFPIMT
EMGTFIINGGERIIVSQLVRSPGVYFNDKVDKNGKVGYGSTVIPNRGAWLELETDSKDIA
YTRIDRTRKIPFTTLVRALGFSGDDEIIDIFGDSDLVRNTIEKDIHKNPADARTDEALKE
IYERLRPGEPKTADSSRSLLTARFFDPRRYDLAAVGRYKINKKLNVKTRLLNQTLAENLV
DGETGEILVEVGTVMTRDVIDSIADALDNGLNSFVYTPNDYAVVTEPVVLQKFKVVSPLD
ADKVVTIVGNSNPDDKVRALTPADILAEMSYFLNLDQGLGKVDDIDHLGNRRIRAVGELL
ANQFRIGLTRMERNVRERMSVQDNEALTPQQIINIRPVTAAIKEFFGSSQLSQFMDQHNP
LSELSHKRRLSALGPGGLTRDRAGYEVRDVHYTHYGRMCPIETPEGPNIGLINNLSSYGH
LNKYGFIQTPYRKVDRSTGKVTNEIVWLTADEEDEYTAAQANSKLNEDGTFSEEIVMGRH
QGNNQEFAASTVDFVDVSPKQVVAVATACIPFLENDDSNRALMGANMQRQAVPLIDPRAP
FVGTGMEYQAAHDSGAAVIAQHAGRVTFSDAEKVEVRREDGSLDVYHITKFRRSNSGTAY
NQRTLVKVGDQVEKGDFIADGPSMEKGEMALGRNPIVAYMTWEGYNFEDAVIMSERLVKE
DVYTSVHLEEFESETRDTKLGPEEITREIPNVGEEALKDLDEMGIIRIGAEVKEGDILVG
KVTPKGEKDLSAEERLLHAIFGDKSREVRDTSLRVPHGGAGIVRDVKIFTRANGDELQSG
VNMLVRVYIAQKRKIKVGDKMAGRHGNKGVVSRIVPVEDMPYLPDGTPVDIMLNPLGVPS
RMNIGQVMELHLGMAARNLGIHIATPVFDGATSEDLWETVEEAGMDGDAKTVLYDGRTGE
PFDNRVSVGVMYMIKLHHMVDDKLHARSTGPYSTVTQQPLGGKAQFGGQRFGEMEVWALE
AYGASNVLQEILTYKSDDVNGRLKAYEAITKGKPIPKPGVPESFRVLVKELQSLGLDMRV
LDEDDKEIELRDLGEGEDDDVMHVDDLEKARKQQAAETARLAQAAENQAQKTEE
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
ttggcaggacatgacgttcaatacgggaaacaccgcacccgtcgaagtttttcaagaatc
aaggaagttcttgatctaccaaatttaattgaaatccaaacggattccttcaaggatttc
ttggagaatggcctcaaagaagtgtttgaagatgtacttccaatttccaatttcacagaa
acaatggaattggaatttgtcggctacgagttgaaggagcctaagtatagcttagaagaa
gctcggattcacgatgcttcctactcggctcctatctttgttactttccgtttgatcaac
aaggaaactggcgaaatcaaaactcaggaagtcttctttggtgatttcccaatcatgacg
gaaatgggaacctttatcatcaatggtggggaacggattattgtttcacaattggtccgc
tcacctggtgtctacttcaacgacaaggttgataagaatggtaaggttggctacggttca
acggtcatccctaaccgaggagcttggttggaattagagaccgactctaaggatatcgcc
tatacgcgtatcgaccggacacgtaagattccctttacaaccctagtccgggctcttggc
ttctctggtgatgatgaaatcattgatatctttggcgatagcgacttggttcgtaatacc
atcgaaaaggatattcacaagaatcctgcggatgccagaactgatgaagccctcaaggaa
atctacgaacgcctgcgtccaggagaacctaagacggctgatagctctcggagccttttg
accgctcgtttctttgatcctcggcgttatgacttggctgccgttggtcgctataagatt
aataagaaacttaatgtcaagactcgtctgctcaaccaaaccttggccgaaaacttggtc
gatggtgaaacaggagaaatcctggttgaagtgggaacggtcatgacacgtgatgttatt
gactcgattgctgacgccctggataatggtcttaacagctttgtttatacaccaaatgac
tacgctgttgtgacagaacctgtcgttctgcaaaagttcaaggtggtctcacctctggat
gcggataaggttgtcactatcgttggtaattcaaatccagacgataaggtgcgtgctttg
acacctgctgatatcttggcagagatgtcttatttccttaatttggatcagggtctcggt
aaggttgacgatatcgaccacttgggtaatcgtcggattcgtgctgttggtgaactcttg
gccaaccaattccgtatcggtttgactcggatggaacgtaacgtgcgtgaacgcatgtct
gtccaagacaatgaagctctgacaccacaacaaatcatcaatatccgtccggttacagct
gcgatcaaggaattctttgggtcttcacaattgtctcaattcatggaccaacacaatcct
ctgtctgagctgtctcacaaacgtcgtttgtcagccttaggccctggcggtttgacacgg
gaccgggctggttacgaagtgcgggatgtgcactacacccactacggtcggatgtgtcca
attgaaactcctgaaggaccaaatatcggtctgattaataacctgtcttcctatggtcac
ctcaacaagtatggctttatccaaaccccttaccgcaaggttgatcgctcaactggtaag
gtcactaatgaaatcgtttggctgacggccgatgaagaagatgagtataccgccgctcag
gctaattctaaactcaatgaagatggtaccttctcagaagaaattgtcatgggccgtcac
caaggtaataaccaagaatttgcagccagcacagttgatttcgtcgacgtttctcctaaa
caggtagttgcggttgcgacagcttgtatcccattcttggaaaacgatgactctaaccgg
gccctcatgggtgccaacatgcaacggcaagctgtgccattgattgatcctagggcacca
tttgttggaaccggtatggaatatcaagcggcccacgactctggtgctgctgtcattgcc
caacacgctggtcgggtaaccttctcagatgctgaaaaggtcgaagttcgccgagaagac
ggttctctggatgtttaccacatcaccaaattccgccgttccaactctggtactgcctac
aaccaacgcacgctggttaaggttggcgaccaagttgaaaagggcgacttcattgctgac
ggtccttctatggaaaaaggggaaatggctcttggacgtaacccaatcgttgcttatatg
acttgggaaggttacaacttcgaggatgcggtcatcatgagtgaacgcctggtcaaagaa
gatgtttacacctctgttcacttggaagaatttgaatctgaaactcgcgataccaagtta
ggccctgaagaaattacccgtgaaattccaaacgttggtgaagaagcccttaaagacctg
gatgaaatgggtattatccgcatcggtgcggaagtcaaggaaggcgatatcttggttggt
aaggtcactcctaagggagaaaaagacctgtcagccgaagaacgcctgctccacgctatc
tttggtgataagtctcgtgaagtgcgggatacttctctgagggttcctcacggtggtgct
ggtatcgtccgcgatgttaagatctttacccgggctaatggggatgaactccagtctggt
gttaatatgctggttcgggtttacatcgctcaaaaacgtaagatcaaggtcggtgacaag
atggccggccgccacggtaacaagggtgtcgtttctcggattgttccggttgaagacatg
ccttacctgcctgacggaacgcctgttgatatcatgctcaacccactgggtgtgccatct
cggatgaatatcggacaagttatggaactccacttaggtatggcagctcgcaacttgggt
atccacatcgcgacaccagtctttgacggagcaacttccgaagatctttgggaaactgtt
gaagaagccggcatggatggtgatgctaagactgttctctacgatggtcgtaccggtgaa
ccatttgacaaccgcgtgtctgttggggtcatgtacatgattaagctccaccacatggtt
gatgataagcttcacgcccgttcaactggtccttactcaaccgttacccaacaacctctg
ggcggtaaagctcagtttggtggtcaacgtttcggggaaatggaagtttgggctttggaa
gcttatggtgcttcaaatgttctccaagaaattttgacctataagtcagatgatgtcaac
ggccgtctcaaggcctatgaagccatcaccaagggtaaaccaattccaaaaccaggtgtg
ccagaatccttccgggtcttggttaaagaattgcagtcacttggtcttgacatgcgggtg
ttggacgaggatgacaaggagattgaattgcgtgatcttggcgaaggtgaagatgacgat
gttatgcacgttgatgatctggaaaaggctcgtaaacaacaggctgctgagactgcccgt
ctagcacaagctgctgaaaatcaggctcaaaagactgaagaatga
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