Solea solea (common sole): 131447935
Help
Entry
131447935 CDS
T10853
Symbol
exosc7
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
ssoe Solea solea (common sole)
Pathway
ssoe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131447935 (exosc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssoe03019
]
131447935 (exosc7)
Messenger RNA biogenesis [BR:
ssoe03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
131447935 (exosc7)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
131447935 (exosc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
131447935
NCBI-ProteinID:
XP_058476023
LinkDB
All DBs
Position
20:19693257..19696408
Genome browser
AA seq
291 aa
AA seq
DB search
MATVKVSEAEKVYILHGIRDDLRVDGRGCEDYRHVEIETDVVSNTDGSAKVTLGYTAVLV
GIKADIGKPKPMVPNEGYLEFFVDCSANATPEFEGRGGEELGTELSNTLYKVFNNKHSMD
LKSLCISAGEHCWVLYVDVLLLQCDGNLYDAISIAIKAALFNTKIPRVHISADEEGGKEI
ELSDDPYDCMRLDVENVPCIVTLCKVGHRHVVDVTLQEKACSVASLIISVTHKGTITCTR
KVGGGSLDPESIFEMTEAGKRVGKALHAPLMALLRQEESLGKKRQKVGFLG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagtaaaagtcagcgaggctgaaaaagtctacattttacacggtatacgggat
gatttgcgggtggacggaagaggctgcgaggactacagacacgtggagatagagactgat
gtggtgtccaacacggacggatctgccaaagtcacactgggttacacagcagttctagtt
gggattaaggctgacattggaaaaccaaagcccatggtgccaaatgaaggatatctggag
tttttcgttgactgttctgccaatgcaacccctgaatttgaaggcagaggaggtgaggag
ctggggacggagctgagtaacactctctacaaagtcttcaacaacaaacacagcatggac
ctgaagagcctgtgcatcagtgcaggagaacactgctgggtgctctatgtggacgtgctg
ctgctgcagtgtgatggaaacttgtatgatgccatttctatagctatcaaggccgcgctc
ttcaatacaaaaattcccagagtgcacatatcggcagacgaggaaggaggaaaggaaatt
gagttgtcagacgacccgtacgactgcatgagactcgatgtagaaaatgtcccctgcatc
gtgaccttgtgcaaggtgggccacagacacgtggtggacgtgactctgcaggagaaggcg
tgctctgtggcgagcctcatcatctctgtcacgcacaagggcaccatcacctgcacgagg
aaggtgggcggaggcagtctggacccagagagcatctttgaaatgacagaggcaggtaaa
cgggttggaaaggctcttcatgctccactcatggcgctgctgcgacaggaggagagtttg
ggaaagaagagacagaaagttggctttttgggttaa
DBGET
integrated database retrieval system
