Solea solea (common sole): 131447952
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Entry
131447952 CDS
T10853
Symbol
col9a2
Name
(RefSeq) collagen alpha-2(IX) chain
KO
K08131
collagen type IX alpha
Organism
ssoe Solea solea (common sole)
Pathway
ssoe04510
Focal adhesion
ssoe04512
ECM-receptor interaction
ssoe04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
131447952 (col9a2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
131447952 (col9a2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
131447952 (col9a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ssoe00535
]
131447952 (col9a2)
Proteoglycans [BR:
ssoe00535
]
Extracellular matrix (ECM) proteoglycans
Others
131447952 (col9a2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
131447952
NCBI-ProteinID:
XP_058476064
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All DBs
Position
20:10837982..10872345
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AA seq
689 aa
AA seq
DB search
MAALCDFLKTWVLLQTLCLALAQVRGPPGLQGQPGPPGPSGTPGSDGIDGEKGPPGPPGP
PGLKGEPGEPGPDGVPGENGIDGLIGAKGDRGPIGSPGPKGKLGPSGEPGPPGIGLPGLA
GIPGPIGLPGEIGPTGSKGIMGPPGAPGVHGPPGKPGPPGKFIGGEEGSADFQCPLNCPA
GPKGPQGLQGVKGHKGRAGVLGEPGSIGKTGPKGENGISGEQGIPGPSGPIGLRGYPGMM
GPKGEAGPRGYKGIGGPVGIPGPPGEEGPRGPPGEPGDKGDKGSRGIQGLQGAVGKKGEN
GLPGIDGKDGTPGIPGIKGSPGQAGRPGPSGPQGAAGLPGGPGAKGGPGDKGEPGPRGHV
GAQGASGPLGEPGLPGEPGMEGIPGPKGDRGQRGPAGPQGVVGKPGSKGERGPIGVPGAQ
GLSGIKGDKGFQGKPGSKGDFGDPGVEGLAGEKGEKGLSGEPGPKGQQGVRGDLGYNGPT
GDPGKPGDQGPPGLPGPRGLNGERGVPGMPGIEGPSGRDSSDQHIIEVVLKMLQERLAAL
AARRDVHGGAGVMGPPGPPGNPGGPGPQGPHGLPGTRGIPGMMGEVGQIGNTGLKGKRGA
KGERGDPGKPHPGAPGPPGIPGPGGVDGVARDGKHGERGPQGSAGNNGLPGAVGAQGLPG
YCEAAMCLAASAYTSPRLQEAGTIKGPSV
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggctgctctctgtgacttcctgaagacctgggttttactgcagaccttgtgcctggct
ctggcccaagtgaggggcccacctggactccagggccagcccggcccaccaggcccatcc
ggcactcccgggtcagatggcattgatggggagaaaggacctcctgggcctcctggtcca
cctggactaaagggagaaccaggagaaccaggtcccgatggagtgccaggagagaacggc
attgatggtttgattggagcaaagggtgaccgaggtccaattggaagccccggccctaag
ggcaaactcgggccaagcggcgagcccggccctccgggaataggcctcccaggactggct
ggcatccctgggccaattggtcttcctggtgaaattggaccaactggatcaaagggcatc
atgggaccacctggggctccaggagttcatggacctcctggcaagcctggtcctccggga
aagtttatcggcggggaagagggtagtgcagacttccagtgtcctcttaattgtccagca
ggaccaaaaggtcctcagggactgcagggagtcaagggacacaaaggacgtgctggtgtt
cttggagagcctggcagcataggaaaaacggggcccaagggagaaaatggcatctctggg
gaacagggcatcccaggaccttcgggtccgataggtctgaggggttatccaggaatgatg
ggtcctaaaggagaggcagggcctcgtggatacaagggcatcggcggacctgtaggaatt
cctgggcctcctggtgaggagggacctcggggaccacctggagagccaggagacaagggc
gacaaaggcagccgaggaatccagggcctgcagggtgcagttggcaaaaagggagagaat
ggtctgccgggcattgatggaaaagatggcacacctggtattccaggaatcaagggcagc
cctggccaagctgggaggcctggtccttctggtcctcagggagcagcgggattgcctggc
ggtcctggggcgaaaggtggacctggagataagggagagcctggaccgcgaggtcatgtt
ggcgcgcagggtgcatctggaccactgggtgaacctggtcttcctggtgagcctggcatg
gaaggaatacctgggcccaagggtgacagaggccagcggggaccggctgggccacaggga
gtcgttggcaaacctggcagcaaaggagagagagggcccatcggtgtcccaggtgcccag
ggccttagtgggatcaagggagacaagggcttccaaggaaaacctggctcaaagggagat
tttggtgaccccggcgttgagggattggctggcgagaaaggtgaaaagggattgtctggt
gaacctgggcctaaaggacagcaaggagttcggggagaccttgggtacaatgggcccact
ggagatcctggtaaaccaggggaccaggggccaccaggacttcctggtcctaggggactc
aatggagagcgaggagtacctggcatgcctggcatagaggggccctcaggccgcgactca
tctgaccagcatattatcgaagtggtgttgaagatgttgcaggagaggctagccgcattg
gcggccaggagggacgtgcacggcggggcaggtgtcatgggacctccagggcccccgggt
aatccaggtggacctggccctcaggggccacatggtttgccaggtactcgaggcattcct
ggtatgatgggagaagtgggacagattggaaacactgggcttaaagggaagagaggagca
aagggagagaggggagatcctggtaaacctcacccaggagcaccaggacctcctggaata
ccaggtcctggcggtgtggatggtgtggcccgggatggtaaacacggtgagagaggacct
cagggatcagccggaaacaacggtctccctggtgcagtgggtgcacaaggtctgccgggc
tactgcgaggcggcaatgtgtctggccgcatccgcatacacctcgccgagactacaggag
gcgggaacaatcaagggacccagtgtttag
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